RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
IRF3-204ENST00000442265 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
IRF3-204ENST00000442265 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
IRF3-204ENST00000442265 MT4P47944 62 aa5.69□□□□□ -1.5
IRF3-204ENST00000442265 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
IRF3-204ENST00000442265 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
IRF3-204ENST00000442265 UQCR11O14957 56 aa5.59□□□□□ -1.51
IRF3-204ENST00000442265 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
IRF3-204ENST00000442265 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
IRF3-204ENST00000442265 TMEM258P61165 79 aa5.55□□□□□ -1.52
IRF3-204ENST00000442265 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
IRF3-204ENST00000442265 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
IRF3-204ENST00000442265 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
IRF3-204ENST00000442265 MIR22HGQ0VDD5 57 aa5.43□□□□□ -1.54
IRF3-204ENST00000442265 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
IRF3-204ENST00000442265 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
IRF3-204ENST00000442265 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
IRF3-204ENST00000442265 K7ERS5 55 aa5.34□□□□□ -1.55
IRF3-204ENST00000442265 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
IRF3-204ENST00000442265 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
IRF3-204ENST00000442265 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
IRF3-204ENST00000442265 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
IRF3-204ENST00000442265 V9GYY9 64 aa5.29□□□□□ -1.56
IRF3-204ENST00000442265 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
IRF3-204ENST00000442265 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
IRF3-204ENST00000442265 Q1T7F1 81 aa5.26□□□□□ -1.57
IRF3-204ENST00000442265 PSPHP1O15172 72 aa5.24□□□□□ -1.57
IRF3-204ENST00000442265 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
IRF3-204ENST00000442265 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
IRF3-204ENST00000442265 A6NED7 52 aa5.05□□□□□ -1.6
IRF3-204ENST00000442265 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
IRF3-204ENST00000442265 MT1AP04731 61 aa5.02□□□□□ -1.61
IRF3-204ENST00000442265 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
IRF3-204ENST00000442265 ROMO1P60602 79 aa4.98□□□□□ -1.61
IRF3-204ENST00000442265 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
IRF3-204ENST00000442265 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
IRF3-204ENST00000442265 RPS28P62857 69 aaKnown RBP4.93□□□□□ -1.62
IRF3-204ENST00000442265 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
IRF3-204ENST00000442265 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
IRF3-204ENST00000442265 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
IRF3-204ENST00000442265 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
IRF3-204ENST00000442265 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
IRF3-204ENST00000442265 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
IRF3-204ENST00000442265 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
IRF3-204ENST00000442265 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
IRF3-204ENST00000442265 MT3P25713 68 aa4.6□□□□□ -1.67
IRF3-204ENST00000442265 PCP4P48539 62 aa4.58□□□□□ -1.68
IRF3-204ENST00000442265 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
IRF3-204ENST00000442265 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
IRF3-204ENST00000442265 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
IRF3-204ENST00000442265 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
IRF3-204ENST00000442265 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
IRF3-204ENST00000442265 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
IRF3-204ENST00000442265 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
IRF3-204ENST00000442265 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
IRF3-204ENST00000442265 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
IRF3-204ENST00000442265 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
IRF3-204ENST00000442265 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
IRF3-204ENST00000442265 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
IRF3-204ENST00000442265 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
IRF3-204ENST00000442265 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
IRF3-204ENST00000442265 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
IRF3-204ENST00000442265 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
IRF3-204ENST00000442265 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
IRF3-204ENST00000442265 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
IRF3-204ENST00000442265 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
IRF3-204ENST00000442265 SVIPQ8NHG7 77 aa3.2□□□□□ -1.9
IRF3-204ENST00000442265 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
IRF3-204ENST00000442265 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
IRF3-204ENST00000442265 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
IRF3-204ENST00000442265 PRM1P04553 51 aa2.51□□□□□ -2.01
IRF3-204ENST00000442265 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
IRF3-204ENST00000442265 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
IRF3-204ENST00000442265 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
IRF3-204ENST00000442265 A0A0A0MQY5 61 aa1.92□□□□□ -2.1
IRF3-204ENST00000442265 INE1O15225 51 aa1.92□□□□□ -2.1
IRF3-204ENST00000442265 H3BS24 57 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 45.2 ms