RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
POLR1E-203ENST00000442009 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
POLR1E-203ENST00000442009 LUZP6Q538Z0 58 aa6.49□□□□□ -1.37
POLR1E-203ENST00000442009 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
POLR1E-203ENST00000442009 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
POLR1E-203ENST00000442009 NDUFAF8A1L188 74 aa6.47□□□□□ -1.37
POLR1E-203ENST00000442009 MT1GP13640 62 aa6.45□□□□□ -1.38
POLR1E-203ENST00000442009 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
POLR1E-203ENST00000442009 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
POLR1E-203ENST00000442009 MT1MQ8N339 61 aa6.38□□□□□ -1.39
POLR1E-203ENST00000442009 KRTAP9-6A8MVA2 160 aa6.34□□□□□ -1.39
POLR1E-203ENST00000442009 KRTAP6-3Q3LI67 103 aa6.29□□□□□ -1.4
POLR1E-203ENST00000442009 LCE1AQ5T7P2 110 aa6.29□□□□□ -1.4
POLR1E-203ENST00000442009 MDN1Q9NU22 5596 aa6.28□□□□□ -1.4
POLR1E-203ENST00000442009 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
POLR1E-203ENST00000442009 A0A0A0MQY5 61 aa6.21□□□□□ -1.42
POLR1E-203ENST00000442009 SPRR2EP22531 72 aa6.15□□□□□ -1.43
POLR1E-203ENST00000442009 SPRR2BP35325 72 aa6.15□□□□□ -1.43
POLR1E-203ENST00000442009 SPRR2AP35326 72 aa6.15□□□□□ -1.43
POLR1E-203ENST00000442009 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
POLR1E-203ENST00000442009 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
POLR1E-203ENST00000442009 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
POLR1E-203ENST00000442009 SPRR2DP22532 72 aa5.92□□□□□ -1.46
POLR1E-203ENST00000442009 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.47
POLR1E-203ENST00000442009 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.47
POLR1E-203ENST00000442009 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.47
POLR1E-203ENST00000442009 NEBP20929 6669 aa5.89□□□□□ -1.47
POLR1E-203ENST00000442009 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
POLR1E-203ENST00000442009 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
POLR1E-203ENST00000442009 MT1AP04731 61 aa5.65□□□□□ -1.5
POLR1E-203ENST00000442009 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
POLR1E-203ENST00000442009 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
POLR1E-203ENST00000442009 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
POLR1E-203ENST00000442009 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
POLR1E-203ENST00000442009 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
POLR1E-203ENST00000442009 INE1O15225 51 aa5.33□□□□□ -1.56
POLR1E-203ENST00000442009 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
POLR1E-203ENST00000442009 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
POLR1E-203ENST00000442009 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
POLR1E-203ENST00000442009 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
POLR1E-203ENST00000442009 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
POLR1E-203ENST00000442009 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
POLR1E-203ENST00000442009 MT4P47944 62 aa5.13□□□□□ -1.59
POLR1E-203ENST00000442009 MT3P25713 68 aa5.1□□□□□ -1.59
POLR1E-203ENST00000442009 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
POLR1E-203ENST00000442009 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
POLR1E-203ENST00000442009 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
POLR1E-203ENST00000442009 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
POLR1E-203ENST00000442009 KRTAP5-2Q701N4 177 aa4.98□□□□□ -1.61
POLR1E-203ENST00000442009 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
POLR1E-203ENST00000442009 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
POLR1E-203ENST00000442009 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
POLR1E-203ENST00000442009 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
POLR1E-203ENST00000442009 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
POLR1E-203ENST00000442009 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
POLR1E-203ENST00000442009 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
POLR1E-203ENST00000442009 PRM1P04553 51 aa4.28□□□□□ -1.72
POLR1E-203ENST00000442009 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
POLR1E-203ENST00000442009 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
POLR1E-203ENST00000442009 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
POLR1E-203ENST00000442009 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
POLR1E-203ENST00000442009 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
POLR1E-203ENST00000442009 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
POLR1E-203ENST00000442009 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
POLR1E-203ENST00000442009 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
POLR1E-203ENST00000442009 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
POLR1E-203ENST00000442009 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
POLR1E-203ENST00000442009 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
POLR1E-203ENST00000442009 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
POLR1E-203ENST00000442009 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
POLR1E-203ENST00000442009 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
POLR1E-203ENST00000442009 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
POLR1E-203ENST00000442009 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
POLR1E-203ENST00000442009 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
POLR1E-203ENST00000442009 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
POLR1E-203ENST00000442009 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
POLR1E-203ENST00000442009 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
POLR1E-203ENST00000442009 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 135.5 ms