RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 STARD9Q9P2P6 4700 aa0.91□□□□□ -2.26
R3HDM1-209ENST00000441871 MT1AP04731 61 aa0.91□□□□□ -2.26
R3HDM1-209ENST00000441871 SPRR2DP22532 72 aa0.91□□□□□ -2.26
R3HDM1-209ENST00000441871 MGAM2Q2M2H8 2515 aa0.9□□□□□ -2.26
R3HDM1-209ENST00000441871 CEP295Q9C0D2 2601 aa0.9□□□□□ -2.26
R3HDM1-209ENST00000441871 WDFY3Q8IZQ1 3526 aa0.9□□□□□ -2.27
R3HDM1-209ENST00000441871 SPRR2BP35325 72 aa0.9□□□□□ -2.27
R3HDM1-209ENST00000441871 CRCT1Q9UGL9 99 aa0.89□□□□□ -2.27
R3HDM1-209ENST00000441871 CENPFP49454 3210 aa0.89□□□□□ -2.27
R3HDM1-209ENST00000441871 KRTAP6-2Q3LI66 62 aa0.87□□□□□ -2.27
R3HDM1-209ENST00000441871 UNC80Q8N2C7 3258 aa0.86□□□□□ -2.27
R3HDM1-209ENST00000441871 BRCA2P51587 3418 aa0.86□□□□□ -2.27
R3HDM1-209ENST00000441871 EYSQ5T1H1 3165 aa0.86□□□□□ -2.27
R3HDM1-209ENST00000441871 SPRR2AP35326 72 aa0.85□□□□□ -2.27
R3HDM1-209ENST00000441871 IGSF10Q6WRI0 2623 aa0.85□□□□□ -2.27
R3HDM1-209ENST00000441871 TENM1Q9UKZ4 2725 aa0.83□□□□□ -2.28
R3HDM1-209ENST00000441871 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
R3HDM1-209ENST00000441871 LRP2P98164 4655 aa0.82□□□□□ -2.28
R3HDM1-209ENST00000441871 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
R3HDM1-209ENST00000441871 DNAH14Q0VDD8 3507 aa0.81□□□□□ -2.28
R3HDM1-209ENST00000441871 KRTAP4-1Q9BYQ7 146 aa0.8□□□□□ -2.28
R3HDM1-209ENST00000441871 SPRR2EP22531 72 aa0.78□□□□□ -2.28
R3HDM1-209ENST00000441871 DNHD1Q96M86 4753 aa0.78□□□□□ -2.29
R3HDM1-209ENST00000441871 RYR1P21817 5038 aa0.77□□□□□ -2.29
R3HDM1-209ENST00000441871 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
R3HDM1-209ENST00000441871 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
R3HDM1-209ENST00000441871 CDH23Q9H251 3354 aa0.76□□□□□ -2.29
R3HDM1-209ENST00000441871 HMCN2Q8NDA2 5059 aa0.76□□□□□ -2.29
R3HDM1-209ENST00000441871 FCGBPQ9Y6R7 5405 aaPredicted RBP0.73□□□□□ -2.29
R3HDM1-209ENST00000441871 MT1EP04732 61 aa0.72□□□□□ -2.29
R3HDM1-209ENST00000441871 BIRC6Q9NR09 4857 aa0.71□□□□□ -2.3
R3HDM1-209ENST00000441871 KIAA1109Q2LD37 5005 aa0.7□□□□□ -2.3
R3HDM1-209ENST00000441871 PCLOQ9Y6V0 5065 aa0.69□□□□□ -2.3
R3HDM1-209ENST00000441871 HYDINQ4G0P3 5121 aa0.69□□□□□ -2.3
R3HDM1-209ENST00000441871 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
R3HDM1-209ENST00000441871 MT1LQ93083 61 aa0.68□□□□□ -2.3
R3HDM1-209ENST00000441871 SPRR2GQ9BYE4 73 aa0.68□□□□□ -2.3
R3HDM1-209ENST00000441871 UBR4Q5T4S7 5183 aa0.68□□□□□ -2.3
R3HDM1-209ENST00000441871 RYR3Q15413 4870 aa0.67□□□□□ -2.3
R3HDM1-209ENST00000441871 MT1HP80294 61 aa0.67□□□□□ -2.3
R3HDM1-209ENST00000441871 KMT2CQ8NEZ4 4911 aaKnown RBP0.67□□□□□ -2.3
R3HDM1-209ENST00000441871 RYR2Q92736 4967 aa0.67□□□□□ -2.3
R3HDM1-209ENST00000441871 MDN1Q9NU22 5596 aa0.66□□□□□ -2.3
R3HDM1-209ENST00000441871 EPPK1P58107 5090 aaKnown RBP0.66□□□□□ -2.3
R3HDM1-209ENST00000441871 HERC2O95714 4834 aa0.64□□□□□ -2.31
R3HDM1-209ENST00000441871 ABCA13Q86UQ4 5058 aa0.64□□□□□ -2.31
R3HDM1-209ENST00000441871 FAT4Q6V0I7 4981 aa0.64□□□□□ -2.31
R3HDM1-209ENST00000441871 USH2AO75445 5202 aa0.63□□□□□ -2.31
R3HDM1-209ENST00000441871 MUC2Q02817 5179 aa0.62□□□□□ -2.31
R3HDM1-209ENST00000441871 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
R3HDM1-209ENST00000441871 MT1XP80297 61 aa0.6□□□□□ -2.31
R3HDM1-209ENST00000441871 SSPOA2VEC9 5147 aa0.6□□□□□ -2.31
R3HDM1-209ENST00000441871 RNF213Q63HN8 5207 aa0.59□□□□□ -2.31
R3HDM1-209ENST00000441871 KRTAP19-8Q3LI54 63 aa0.57□□□□□ -2.32
R3HDM1-209ENST00000441871 KRTAP5-10Q6L8G5 202 aa0.57□□□□□ -2.32
R3HDM1-209ENST00000441871 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
R3HDM1-209ENST00000441871 MT1GP13640 62 aa0.53□□□□□ -2.32
R3HDM1-209ENST00000441871 KRTAP19-7Q3SYF9 63 aa0.52□□□□□ -2.33
R3HDM1-209ENST00000441871 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
R3HDM1-209ENST00000441871 KMT2DO14686 5537 aa0.51□□□□□ -2.33
R3HDM1-209ENST00000441871 NEBP20929 6669 aa0.5□□□□□ -2.33
R3HDM1-209ENST00000441871 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
R3HDM1-209ENST00000441871 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
R3HDM1-209ENST00000441871 MACF1Q9UPN3 7388 aaKnown RBP0.48□□□□□ -2.33
R3HDM1-209ENST00000441871 KRTAP19-2Q3LHN2 52 aa0.47□□□□□ -2.33
R3HDM1-209ENST00000441871 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
R3HDM1-209ENST00000441871 MUC12Q9UKN1 5478 aa0.47□□□□□ -2.33
R3HDM1-209ENST00000441871 MT1BP07438 61 aa0.46□□□□□ -2.34
R3HDM1-209ENST00000441871 MT2AP02795 61 aa0.44□□□□□ -2.34
R3HDM1-209ENST00000441871 MT1MQ8N339 61 aa0.42□□□□□ -2.34
R3HDM1-209ENST00000441871 DSTQ03001 7570 aaKnown RBP0.41□□□□□ -2.34
R3HDM1-209ENST00000441871 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
R3HDM1-209ENST00000441871 KRTAP20-1Q3LI63 56 aa0.39□□□□□ -2.35
R3HDM1-209ENST00000441871 MT1HL1P0DM35 61 aa0.34□□□□□ -2.36
R3HDM1-209ENST00000441871 MT1FP04733 61 aa0.31□□□□□ -2.36
R3HDM1-209ENST00000441871 KRTAP19-6Q3LI70 58 aa0.29□□□□□ -2.36
R3HDM1-209ENST00000441871 MT4P47944 62 aa0.25□□□□□ -2.37
R3HDM1-209ENST00000441871 KRTAP20-2Q3LI61 65 aa0.2□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 86.2 ms