RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
UBE2F-215ENST00000441728 TMEM258P61165 79 aa6.94□□□□□ -1.3
UBE2F-215ENST00000441728 PRR15LQ9BU68 103 aa6.94□□□□□ -1.3
UBE2F-215ENST00000441728 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
UBE2F-215ENST00000441728 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
UBE2F-215ENST00000441728 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
UBE2F-215ENST00000441728 A8MU10 97 aa6.86□□□□□ -1.31
UBE2F-215ENST00000441728 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
UBE2F-215ENST00000441728 TNP1P09430 55 aa6.84□□□□□ -1.31
UBE2F-215ENST00000441728 KRTAP5-7Q6L8G8 165 aa6.82□□□□□ -1.32
UBE2F-215ENST00000441728 KRTAP5-3Q6L8H2 238 aa6.8□□□□□ -1.32
UBE2F-215ENST00000441728 UQCR11O14957 56 aa6.71□□□□□ -1.34
UBE2F-215ENST00000441728 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
UBE2F-215ENST00000441728 KRTAP20-2Q3LI61 65 aa6.66□□□□□ -1.34
UBE2F-215ENST00000441728 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
UBE2F-215ENST00000441728 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
UBE2F-215ENST00000441728 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
UBE2F-215ENST00000441728 V9GYY9 64 aa6.58□□□□□ -1.36
UBE2F-215ENST00000441728 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
UBE2F-215ENST00000441728 Q1T7F1 81 aa6.52□□□□□ -1.37
UBE2F-215ENST00000441728 KRTAP5-5Q701N2 237 aaPredicted RBP6.49□□□□□ -1.37
UBE2F-215ENST00000441728 PSPHP1O15172 72 aa6.46□□□□□ -1.38
UBE2F-215ENST00000441728 K7ERS5 55 aa6.43□□□□□ -1.38
UBE2F-215ENST00000441728 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
UBE2F-215ENST00000441728 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
UBE2F-215ENST00000441728 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
UBE2F-215ENST00000441728 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
UBE2F-215ENST00000441728 A6NED7 52 aa6.27□□□□□ -1.41
UBE2F-215ENST00000441728 PCP4P48539 62 aa6.25□□□□□ -1.41
UBE2F-215ENST00000441728 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
UBE2F-215ENST00000441728 KRTAP4-11Q9BYQ6 195 aa6.19□□□□□ -1.42
UBE2F-215ENST00000441728 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
UBE2F-215ENST00000441728 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
UBE2F-215ENST00000441728 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
UBE2F-215ENST00000441728 KRTAP5-2Q701N4 177 aa6.03□□□□□ -1.44
UBE2F-215ENST00000441728 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
UBE2F-215ENST00000441728 MT1AP04731 61 aa6□□□□□ -1.45
UBE2F-215ENST00000441728 ROMO1P60602 79 aa6□□□□□ -1.45
UBE2F-215ENST00000441728 KRTAP5-8O75690 187 aa5.96□□□□□ -1.46
UBE2F-215ENST00000441728 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
UBE2F-215ENST00000441728 MUC5ACP98088 5654 aa5.86□□□□□ -1.47
UBE2F-215ENST00000441728 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
UBE2F-215ENST00000441728 AHNAKQ09666 5890 aaKnown RBP5.84□□□□□ -1.48
UBE2F-215ENST00000441728 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
UBE2F-215ENST00000441728 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
UBE2F-215ENST00000441728 OBSCNQ5VST9 7968 aa5.78□□□□□ -1.48
UBE2F-215ENST00000441728 MUC5BQ9HC84 5762 aaPredicted RBP5.76□□□□□ -1.49
UBE2F-215ENST00000441728 H3BS24 57 aa5.64□□□□□ -1.51
UBE2F-215ENST00000441728 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
UBE2F-215ENST00000441728 MT3P25713 68 aa5.55□□□□□ -1.52
UBE2F-215ENST00000441728 KRTAP5-1Q6L8H4 278 aa5.48□□□□□ -1.53
UBE2F-215ENST00000441728 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
UBE2F-215ENST00000441728 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
UBE2F-215ENST00000441728 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
UBE2F-215ENST00000441728 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
UBE2F-215ENST00000441728 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
UBE2F-215ENST00000441728 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
UBE2F-215ENST00000441728 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
UBE2F-215ENST00000441728 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
UBE2F-215ENST00000441728 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
UBE2F-215ENST00000441728 LCE1CQ5T751 118 aa4.77□□□□□ -1.65
UBE2F-215ENST00000441728 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
UBE2F-215ENST00000441728 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
UBE2F-215ENST00000441728 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
UBE2F-215ENST00000441728 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
UBE2F-215ENST00000441728 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
UBE2F-215ENST00000441728 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
UBE2F-215ENST00000441728 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
UBE2F-215ENST00000441728 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
UBE2F-215ENST00000441728 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
UBE2F-215ENST00000441728 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
UBE2F-215ENST00000441728 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
UBE2F-215ENST00000441728 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
UBE2F-215ENST00000441728 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
UBE2F-215ENST00000441728 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
UBE2F-215ENST00000441728 PRM1P04553 51 aa3.05□□□□□ -1.92
UBE2F-215ENST00000441728 INE1O15225 51 aa2.8□□□□□ -1.96
UBE2F-215ENST00000441728 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 1333.7 ms