RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 Q1T7F1 81 aa5.79□□□□□ -1.48
TRAPPC12-209ENST00000441099 V9GYY9 64 aa5.79□□□□□ -1.48
TRAPPC12-209ENST00000441099 PSPHP1O15172 72 aa5.76□□□□□ -1.49
TRAPPC12-209ENST00000441099 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
TRAPPC12-209ENST00000441099 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
TRAPPC12-209ENST00000441099 MT1GP13640 62 aa5.72□□□□□ -1.49
TRAPPC12-209ENST00000441099 MT1LQ93083 61 aa5.69□□□□□ -1.5
TRAPPC12-209ENST00000441099 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
TRAPPC12-209ENST00000441099 K7ERS5 55 aa5.63□□□□□ -1.51
TRAPPC12-209ENST00000441099 MT1MQ8N339 61 aa5.63□□□□□ -1.51
TRAPPC12-209ENST00000441099 PCP4P48539 62 aa5.62□□□□□ -1.51
TRAPPC12-209ENST00000441099 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
TRAPPC12-209ENST00000441099 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
TRAPPC12-209ENST00000441099 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
TRAPPC12-209ENST00000441099 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
TRAPPC12-209ENST00000441099 A6NED7 52 aa5.56□□□□□ -1.52
TRAPPC12-209ENST00000441099 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
TRAPPC12-209ENST00000441099 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
TRAPPC12-209ENST00000441099 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
TRAPPC12-209ENST00000441099 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
TRAPPC12-209ENST00000441099 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
TRAPPC12-209ENST00000441099 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
TRAPPC12-209ENST00000441099 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
TRAPPC12-209ENST00000441099 ROMO1P60602 79 aa5.31□□□□□ -1.56
TRAPPC12-209ENST00000441099 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
TRAPPC12-209ENST00000441099 MT4P47944 62 aa5.26□□□□□ -1.57
TRAPPC12-209ENST00000441099 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
TRAPPC12-209ENST00000441099 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
TRAPPC12-209ENST00000441099 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
TRAPPC12-209ENST00000441099 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
TRAPPC12-209ENST00000441099 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
TRAPPC12-209ENST00000441099 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC12-209ENST00000441099 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
TRAPPC12-209ENST00000441099 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
TRAPPC12-209ENST00000441099 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
TRAPPC12-209ENST00000441099 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
TRAPPC12-209ENST00000441099 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
TRAPPC12-209ENST00000441099 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
TRAPPC12-209ENST00000441099 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
TRAPPC12-209ENST00000441099 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
TRAPPC12-209ENST00000441099 KRTAP5-10Q6L8G5 202 aa4.88□□□□□ -1.63
TRAPPC12-209ENST00000441099 MT1AP04731 61 aa4.84□□□□□ -1.63
TRAPPC12-209ENST00000441099 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
TRAPPC12-209ENST00000441099 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
TRAPPC12-209ENST00000441099 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
TRAPPC12-209ENST00000441099 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
TRAPPC12-209ENST00000441099 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
TRAPPC12-209ENST00000441099 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
TRAPPC12-209ENST00000441099 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
TRAPPC12-209ENST00000441099 MT3P25713 68 aa4.42□□□□□ -1.7
TRAPPC12-209ENST00000441099 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
TRAPPC12-209ENST00000441099 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
TRAPPC12-209ENST00000441099 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
TRAPPC12-209ENST00000441099 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.73
TRAPPC12-209ENST00000441099 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
TRAPPC12-209ENST00000441099 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
TRAPPC12-209ENST00000441099 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
TRAPPC12-209ENST00000441099 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
TRAPPC12-209ENST00000441099 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
TRAPPC12-209ENST00000441099 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC12-209ENST00000441099 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
TRAPPC12-209ENST00000441099 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
TRAPPC12-209ENST00000441099 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
TRAPPC12-209ENST00000441099 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
TRAPPC12-209ENST00000441099 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
TRAPPC12-209ENST00000441099 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
TRAPPC12-209ENST00000441099 H3BS24 57 aa3.45□□□□□ -1.86
TRAPPC12-209ENST00000441099 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
TRAPPC12-209ENST00000441099 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
TRAPPC12-209ENST00000441099 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
TRAPPC12-209ENST00000441099 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
TRAPPC12-209ENST00000441099 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
TRAPPC12-209ENST00000441099 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
TRAPPC12-209ENST00000441099 PRM1P04553 51 aa2.72□□□□□ -1.97
TRAPPC12-209ENST00000441099 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
TRAPPC12-209ENST00000441099 INE1O15225 51 aa2.5□□□□□ -2.01
TRAPPC12-209ENST00000441099 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
TRAPPC12-209ENST00000441099 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 102.2 ms