RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
CCDC140-202ENST00000440903 MT1BP07438 61 aa2.14□□□□□ -2.07
CCDC140-202ENST00000440903 PMAIP1Q13794 54 aa2.13□□□□□ -2.07
CCDC140-202ENST00000440903 KRTAP19-6Q3LI70 58 aa2.13□□□□□ -2.07
CCDC140-202ENST00000440903 A8MU10 97 aa2.12□□□□□ -2.07
CCDC140-202ENST00000440903 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
CCDC140-202ENST00000440903 FCGBPQ9Y6R7 5405 aaPredicted RBP2.1□□□□□ -2.07
CCDC140-202ENST00000440903 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
CCDC140-202ENST00000440903 PRAC1Q96KF2 57 aa2.1□□□□□ -2.07
CCDC140-202ENST00000440903 CDC42SE1Q9NRR8 79 aa2.1□□□□□ -2.07
CCDC140-202ENST00000440903 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
CCDC140-202ENST00000440903 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
CCDC140-202ENST00000440903 KRTAP12-2P59991 146 aa2.08□□□□□ -2.08
CCDC140-202ENST00000440903 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
CCDC140-202ENST00000440903 SYNE2Q8WXH0 6885 aaKnown RBP2.07□□□□□ -2.08
CCDC140-202ENST00000440903 MT1XP80297 61 aa2.05□□□□□ -2.08
CCDC140-202ENST00000440903 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
CCDC140-202ENST00000440903 TNP1P09430 55 aa2.03□□□□□ -2.08
CCDC140-202ENST00000440903 ROMO1P60602 79 aa1.99□□□□□ -2.09
CCDC140-202ENST00000440903 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
CCDC140-202ENST00000440903 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
CCDC140-202ENST00000440903 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
CCDC140-202ENST00000440903 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
CCDC140-202ENST00000440903 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
CCDC140-202ENST00000440903 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
CCDC140-202ENST00000440903 PP632Q6XCG6 107 aa1.92□□□□□ -2.1
CCDC140-202ENST00000440903 SPRR2FQ96RM1 72 aa1.9□□□□□ -2.11
CCDC140-202ENST00000440903 NEBP20929 6669 aa1.9□□□□□ -2.11
CCDC140-202ENST00000440903 KMT2DO14686 5537 aa1.86□□□□□ -2.11
CCDC140-202ENST00000440903 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
CCDC140-202ENST00000440903 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
CCDC140-202ENST00000440903 SPRR2EP22531 72 aa1.85□□□□□ -2.11
CCDC140-202ENST00000440903 SPRR2BP35325 72 aa1.85□□□□□ -2.11
CCDC140-202ENST00000440903 SPRR2AP35326 72 aa1.85□□□□□ -2.11
CCDC140-202ENST00000440903 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
CCDC140-202ENST00000440903 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
CCDC140-202ENST00000440903 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
CCDC140-202ENST00000440903 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
CCDC140-202ENST00000440903 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
CCDC140-202ENST00000440903 MT1EP04732 61 aa1.82□□□□□ -2.12
CCDC140-202ENST00000440903 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
CCDC140-202ENST00000440903 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
CCDC140-202ENST00000440903 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
CCDC140-202ENST00000440903 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
CCDC140-202ENST00000440903 SPRR2DP22532 72 aa1.79□□□□□ -2.12
CCDC140-202ENST00000440903 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.12
CCDC140-202ENST00000440903 MT1GP13640 62 aa1.77□□□□□ -2.13
CCDC140-202ENST00000440903 MT1LQ93083 61 aa1.77□□□□□ -2.13
CCDC140-202ENST00000440903 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
CCDC140-202ENST00000440903 MT1MQ8N339 61 aa1.73□□□□□ -2.13
CCDC140-202ENST00000440903 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
CCDC140-202ENST00000440903 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
CCDC140-202ENST00000440903 LUZP6Q538Z0 58 aa1.65□□□□□ -2.15
CCDC140-202ENST00000440903 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
CCDC140-202ENST00000440903 SPRR5A0A1B0GTR4 108 aa1.56□□□□□ -2.16
CCDC140-202ENST00000440903 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
CCDC140-202ENST00000440903 MT4P47944 62 aa1.55□□□□□ -2.16
CCDC140-202ENST00000440903 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
CCDC140-202ENST00000440903 MT1AP04731 61 aa1.53□□□□□ -2.16
CCDC140-202ENST00000440903 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
CCDC140-202ENST00000440903 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
CCDC140-202ENST00000440903 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
CCDC140-202ENST00000440903 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
CCDC140-202ENST00000440903 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
CCDC140-202ENST00000440903 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
CCDC140-202ENST00000440903 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
CCDC140-202ENST00000440903 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
CCDC140-202ENST00000440903 INE1O15225 51 aa1.4□□□□□ -2.19
CCDC140-202ENST00000440903 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
CCDC140-202ENST00000440903 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
CCDC140-202ENST00000440903 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
CCDC140-202ENST00000440903 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
CCDC140-202ENST00000440903 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
CCDC140-202ENST00000440903 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
CCDC140-202ENST00000440903 PRM1P04553 51 aa1.01□□□□□ -2.25
CCDC140-202ENST00000440903 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
CCDC140-202ENST00000440903 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
CCDC140-202ENST00000440903 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 68 ms