RNA–Protein interactions for RNA: ENST00000440812.7

SMG7-205, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG7, Length 1,190 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-205ENST00000440812 KRTAP5-4Q6L8H1 288 aa7.26□□□□□ -1.25
SMG7-205ENST00000440812 TMEM258P61165 79 aa7.25□□□□□ -1.25
SMG7-205ENST00000440812 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
SMG7-205ENST00000440812 KRTAP5-10Q6L8G5 202 aa7.17□□□□□ -1.26
SMG7-205ENST00000440812 SMIM26A0A096LP01 95 aa7.16□□□□□ -1.26
SMG7-205ENST00000440812 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.26
SMG7-205ENST00000440812 A0A1B0GU69 56 aa7.14□□□□□ -1.27
SMG7-205ENST00000440812 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
SMG7-205ENST00000440812 TNP1P09430 55 aa7.13□□□□□ -1.27
SMG7-205ENST00000440812 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
SMG7-205ENST00000440812 KRTAP5-3Q6L8H2 238 aa6.94□□□□□ -1.3
SMG7-205ENST00000440812 RPS28P62857 69 aaKnown RBP6.93□□□□□ -1.3
SMG7-205ENST00000440812 KRTAP20-2Q3LI61 65 aa6.9□□□□□ -1.3
SMG7-205ENST00000440812 KRTAP5-7Q6L8G8 165 aa6.9□□□□□ -1.3
SMG7-205ENST00000440812 KRTAP5-5Q701N2 237 aaPredicted RBP6.87□□□□□ -1.31
SMG7-205ENST00000440812 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
SMG7-205ENST00000440812 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
SMG7-205ENST00000440812 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
SMG7-205ENST00000440812 SYNE1Q8NF91 8797 aaKnown RBP6.72□□□□□ -1.33
SMG7-205ENST00000440812 KRTAP12-4P60329 112 aa6.69□□□□□ -1.34
SMG7-205ENST00000440812 LINC01558Q9Y6Z2 57 aa6.69□□□□□ -1.34
SMG7-205ENST00000440812 Q1T7F1 81 aa6.68□□□□□ -1.34
SMG7-205ENST00000440812 V9GYY9 64 aa6.66□□□□□ -1.34
SMG7-205ENST00000440812 PSPHP1O15172 72 aa6.61□□□□□ -1.35
SMG7-205ENST00000440812 UQCR11O14957 56 aa6.56□□□□□ -1.36
SMG7-205ENST00000440812 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
SMG7-205ENST00000440812 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
SMG7-205ENST00000440812 A6NED7 52 aa6.41□□□□□ -1.38
SMG7-205ENST00000440812 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
SMG7-205ENST00000440812 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
SMG7-205ENST00000440812 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
SMG7-205ENST00000440812 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
SMG7-205ENST00000440812 BRK1Q8WUW1 75 aa6.34□□□□□ -1.39
SMG7-205ENST00000440812 KRTAP6-1Q3LI64 71 aa6.33□□□□□ -1.4
SMG7-205ENST00000440812 KRTAP5-2Q701N4 177 aa6.31□□□□□ -1.4
SMG7-205ENST00000440812 MT1AP04731 61 aa6.28□□□□□ -1.4
SMG7-205ENST00000440812 K7ERS5 55 aa6.27□□□□□ -1.41
SMG7-205ENST00000440812 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
SMG7-205ENST00000440812 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
SMG7-205ENST00000440812 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
SMG7-205ENST00000440812 PRO0628Q9UI54 55 aa6.15□□□□□ -1.42
SMG7-205ENST00000440812 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
SMG7-205ENST00000440812 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
SMG7-205ENST00000440812 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
SMG7-205ENST00000440812 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
SMG7-205ENST00000440812 MUC5ACP98088 5654 aa6.02□□□□□ -1.45
SMG7-205ENST00000440812 AHNAKQ09666 5890 aaKnown RBP6.02□□□□□ -1.45
SMG7-205ENST00000440812 MUC5BQ9HC84 5762 aaPredicted RBP6.01□□□□□ -1.45
SMG7-205ENST00000440812 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
SMG7-205ENST00000440812 ROMO1P60602 79 aa5.86□□□□□ -1.47
SMG7-205ENST00000440812 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
SMG7-205ENST00000440812 MT3P25713 68 aa5.73□□□□□ -1.49
SMG7-205ENST00000440812 KRTAP5-1Q6L8H4 278 aa5.73□□□□□ -1.49
SMG7-205ENST00000440812 KTN1-AS1Q86SY8 53 aa5.72□□□□□ -1.49
SMG7-205ENST00000440812 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
SMG7-205ENST00000440812 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
SMG7-205ENST00000440812 LCE1EQ5T753 118 aa5.29□□□□□ -1.56
SMG7-205ENST00000440812 H3BS24 57 aa5.28□□□□□ -1.56
SMG7-205ENST00000440812 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
SMG7-205ENST00000440812 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
SMG7-205ENST00000440812 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
SMG7-205ENST00000440812 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
SMG7-205ENST00000440812 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
SMG7-205ENST00000440812 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
SMG7-205ENST00000440812 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
SMG7-205ENST00000440812 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
SMG7-205ENST00000440812 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
SMG7-205ENST00000440812 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
SMG7-205ENST00000440812 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
SMG7-205ENST00000440812 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
SMG7-205ENST00000440812 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
SMG7-205ENST00000440812 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
SMG7-205ENST00000440812 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
SMG7-205ENST00000440812 MUC19Q7Z5P9 8384 aa3.76□□□□□ -1.81
SMG7-205ENST00000440812 INE1O15225 51 aa3.63□□□□□ -1.83
SMG7-205ENST00000440812 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
SMG7-205ENST00000440812 PRM1P04553 51 aa3.03□□□□□ -1.92
SMG7-205ENST00000440812 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms