RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
PUM1-207ENST00000440538 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
PUM1-207ENST00000440538 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
PUM1-207ENST00000440538 KRTAP9-7A8MTY7 169 aa2.34□□□□□ -2.03
PUM1-207ENST00000440538 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
PUM1-207ENST00000440538 SPRR2EP22531 72 aa2.29□□□□□ -2.04
PUM1-207ENST00000440538 SPRR2BP35325 72 aa2.29□□□□□ -2.04
PUM1-207ENST00000440538 SPRR2AP35326 72 aa2.29□□□□□ -2.04
PUM1-207ENST00000440538 KRTAP4-7Q9BYR0 210 aa2.27□□□□□ -2.05
PUM1-207ENST00000440538 KRTAP19-7Q3SYF9 63 aa2.27□□□□□ -2.05
PUM1-207ENST00000440538 KRTAP19-4Q3LI73 84 aa2.26□□□□□ -2.05
PUM1-207ENST00000440538 MT1EP04732 61 aa2.23□□□□□ -2.05
PUM1-207ENST00000440538 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
PUM1-207ENST00000440538 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
PUM1-207ENST00000440538 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
PUM1-207ENST00000440538 KRTAP9-6A8MVA2 160 aa2.21□□□□□ -2.06
PUM1-207ENST00000440538 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
PUM1-207ENST00000440538 LCE3CQ5T5A8 94 aa2.19□□□□□ -2.06
PUM1-207ENST00000440538 SPRR2DP22532 72 aa2.19□□□□□ -2.06
PUM1-207ENST00000440538 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
PUM1-207ENST00000440538 MT1LQ93083 61 aa2.18□□□□□ -2.06
PUM1-207ENST00000440538 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
PUM1-207ENST00000440538 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
PUM1-207ENST00000440538 KRTAP5-9P26371 169 aa2.17□□□□□ -2.06
PUM1-207ENST00000440538 NEBP20929 6669 aa2.16□□□□□ -2.06
PUM1-207ENST00000440538 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
PUM1-207ENST00000440538 MT1GP13640 62 aa2.13□□□□□ -2.07
PUM1-207ENST00000440538 MT1MQ8N339 61 aa2.13□□□□□ -2.07
PUM1-207ENST00000440538 LCE5AQ5TCM9 118 aa2.1□□□□□ -2.07
PUM1-207ENST00000440538 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
PUM1-207ENST00000440538 KRTAP9-4Q9BYQ2 154 aa2.1□□□□□ -2.07
PUM1-207ENST00000440538 LCE3BQ5TA77 95 aa2.09□□□□□ -2.08
PUM1-207ENST00000440538 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
PUM1-207ENST00000440538 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
PUM1-207ENST00000440538 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
PUM1-207ENST00000440538 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
PUM1-207ENST00000440538 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
PUM1-207ENST00000440538 MT4P47944 62 aa2.01□□□□□ -2.09
PUM1-207ENST00000440538 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
PUM1-207ENST00000440538 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PUM1-207ENST00000440538 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
PUM1-207ENST00000440538 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
PUM1-207ENST00000440538 LCE1DQ5T752 114 aa1.95□□□□□ -2.1
PUM1-207ENST00000440538 LCE4AQ5TA78 99 aa1.94□□□□□ -2.1
PUM1-207ENST00000440538 KRTAP4-2Q9BYR5 136 aa1.92□□□□□ -2.1
PUM1-207ENST00000440538 KRTAP6-1Q3LI64 71 aa1.89□□□□□ -2.11
PUM1-207ENST00000440538 MT3P25713 68 aa1.89□□□□□ -2.11
PUM1-207ENST00000440538 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
PUM1-207ENST00000440538 MT1AP04731 61 aa1.82□□□□□ -2.12
PUM1-207ENST00000440538 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
PUM1-207ENST00000440538 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
PUM1-207ENST00000440538 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
PUM1-207ENST00000440538 PRM1P04553 51 aa1.77□□□□□ -2.13
PUM1-207ENST00000440538 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
PUM1-207ENST00000440538 KRTAP5-4Q6L8H1 288 aa1.76□□□□□ -2.13
PUM1-207ENST00000440538 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
PUM1-207ENST00000440538 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
PUM1-207ENST00000440538 LCE3EQ5T5B0 92 aa1.7□□□□□ -2.14
PUM1-207ENST00000440538 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
PUM1-207ENST00000440538 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
PUM1-207ENST00000440538 KRTAP5-3Q6L8H2 238 aa1.62□□□□□ -2.15
PUM1-207ENST00000440538 MUC5ACP98088 5654 aa1.59□□□□□ -2.16
PUM1-207ENST00000440538 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
PUM1-207ENST00000440538 LCE1EQ5T753 118 aa1.57□□□□□ -2.16
PUM1-207ENST00000440538 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
PUM1-207ENST00000440538 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
PUM1-207ENST00000440538 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
PUM1-207ENST00000440538 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
PUM1-207ENST00000440538 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
PUM1-207ENST00000440538 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
PUM1-207ENST00000440538 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
PUM1-207ENST00000440538 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
PUM1-207ENST00000440538 KRTAP4-4Q9BYR3 166 aa1.27□□□□□ -2.21
PUM1-207ENST00000440538 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
PUM1-207ENST00000440538 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
PUM1-207ENST00000440538 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
PUM1-207ENST00000440538 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 31 ms