RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 MT4P47944 62 aa7.03□□□□□ -1.28
NCKIPSD-206ENST00000439518 PRR15LQ9BU68 103 aa7.03□□□□□ -1.28
NCKIPSD-206ENST00000439518 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
NCKIPSD-206ENST00000439518 KRTAP5-4Q6L8H1 288 aa6.99□□□□□ -1.29
NCKIPSD-206ENST00000439518 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
NCKIPSD-206ENST00000439518 KRTAP12-3P60328 96 aa6.9□□□□□ -1.3
NCKIPSD-206ENST00000439518 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
NCKIPSD-206ENST00000439518 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
NCKIPSD-206ENST00000439518 UQCR11O14957 56 aa6.82□□□□□ -1.32
NCKIPSD-206ENST00000439518 AHNAK2Q8IVF2 5795 aa6.81□□□□□ -1.32
NCKIPSD-206ENST00000439518 TMEM258P61165 79 aa6.75□□□□□ -1.33
NCKIPSD-206ENST00000439518 KRTAP5-10Q6L8G5 202 aa6.72□□□□□ -1.33
NCKIPSD-206ENST00000439518 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
NCKIPSD-206ENST00000439518 KRTAP5-5Q701N2 237 aaPredicted RBP6.66□□□□□ -1.34
NCKIPSD-206ENST00000439518 MIR22HGQ0VDD5 57 aa6.64□□□□□ -1.35
NCKIPSD-206ENST00000439518 KRTAP20-2Q3LI61 65 aa6.58□□□□□ -1.36
NCKIPSD-206ENST00000439518 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
NCKIPSD-206ENST00000439518 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
NCKIPSD-206ENST00000439518 K7ERS5 55 aa6.52□□□□□ -1.37
NCKIPSD-206ENST00000439518 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
NCKIPSD-206ENST00000439518 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
NCKIPSD-206ENST00000439518 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
NCKIPSD-206ENST00000439518 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
NCKIPSD-206ENST00000439518 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
NCKIPSD-206ENST00000439518 PSPHP1O15172 72 aa6.43□□□□□ -1.38
NCKIPSD-206ENST00000439518 V9GYY9 64 aa6.42□□□□□ -1.38
NCKIPSD-206ENST00000439518 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
NCKIPSD-206ENST00000439518 Q1T7F1 81 aa6.39□□□□□ -1.39
NCKIPSD-206ENST00000439518 SYNE1Q8NF91 8797 aaKnown RBP6.35□□□□□ -1.39
NCKIPSD-206ENST00000439518 PCP4P48539 62 aa6.34□□□□□ -1.39
NCKIPSD-206ENST00000439518 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
NCKIPSD-206ENST00000439518 A6NED7 52 aa6.2□□□□□ -1.42
NCKIPSD-206ENST00000439518 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
NCKIPSD-206ENST00000439518 MT1AP04731 61 aa6.14□□□□□ -1.43
NCKIPSD-206ENST00000439518 KRTAP6-1Q3LI64 71 aa6.12□□□□□ -1.43
NCKIPSD-206ENST00000439518 KRTAP5-2Q701N4 177 aa6.1□□□□□ -1.43
NCKIPSD-206ENST00000439518 ROMO1P60602 79 aa6.08□□□□□ -1.44
NCKIPSD-206ENST00000439518 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
NCKIPSD-206ENST00000439518 KRTAP9-6A8MVA2 160 aa6.02□□□□□ -1.45
NCKIPSD-206ENST00000439518 RPS28P62857 69 aaKnown RBP6.02□□□□□ -1.45
NCKIPSD-206ENST00000439518 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
NCKIPSD-206ENST00000439518 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
NCKIPSD-206ENST00000439518 KRTAP5-8O75690 187 aa5.85□□□□□ -1.47
NCKIPSD-206ENST00000439518 OBSCNQ5VST9 7968 aa5.76□□□□□ -1.49
NCKIPSD-206ENST00000439518 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
NCKIPSD-206ENST00000439518 MUC5BQ9HC84 5762 aaPredicted RBP5.64□□□□□ -1.51
NCKIPSD-206ENST00000439518 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
NCKIPSD-206ENST00000439518 MT3P25713 68 aa5.62□□□□□ -1.51
NCKIPSD-206ENST00000439518 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
NCKIPSD-206ENST00000439518 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
NCKIPSD-206ENST00000439518 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
NCKIPSD-206ENST00000439518 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
NCKIPSD-206ENST00000439518 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
NCKIPSD-206ENST00000439518 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
NCKIPSD-206ENST00000439518 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
NCKIPSD-206ENST00000439518 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
NCKIPSD-206ENST00000439518 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
NCKIPSD-206ENST00000439518 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
NCKIPSD-206ENST00000439518 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
NCKIPSD-206ENST00000439518 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
NCKIPSD-206ENST00000439518 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
NCKIPSD-206ENST00000439518 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
NCKIPSD-206ENST00000439518 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
NCKIPSD-206ENST00000439518 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
NCKIPSD-206ENST00000439518 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
NCKIPSD-206ENST00000439518 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
NCKIPSD-206ENST00000439518 H3BS24 57 aa4.23□□□□□ -1.73
NCKIPSD-206ENST00000439518 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
NCKIPSD-206ENST00000439518 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
NCKIPSD-206ENST00000439518 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
NCKIPSD-206ENST00000439518 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
NCKIPSD-206ENST00000439518 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
NCKIPSD-206ENST00000439518 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
NCKIPSD-206ENST00000439518 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
NCKIPSD-206ENST00000439518 INE1O15225 51 aa3.13□□□□□ -1.91
NCKIPSD-206ENST00000439518 PRM1P04553 51 aa3.09□□□□□ -1.91
NCKIPSD-206ENST00000439518 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
NCKIPSD-206ENST00000439518 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 146.1 ms