RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 LCE3AQ5TA76 89 aa2.56□□□□□ -2
ERCC8-203ENST00000439176 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
ERCC8-203ENST00000439176 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
ERCC8-203ENST00000439176 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
ERCC8-203ENST00000439176 A0A0D9SG42 100 aa2.52□□□□□ -2.01
ERCC8-203ENST00000439176 MT1EP04732 61 aa2.52□□□□□ -2.01
ERCC8-203ENST00000439176 KRTAP19-7Q3SYF9 63 aa2.52□□□□□ -2.01
ERCC8-203ENST00000439176 SERP2Q8N6R1 65 aa2.52□□□□□ -2.01
ERCC8-203ENST00000439176 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
ERCC8-203ENST00000439176 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
ERCC8-203ENST00000439176 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
ERCC8-203ENST00000439176 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
ERCC8-203ENST00000439176 COA5Q86WW8 74 aa2.51□□□□□ -2.01
ERCC8-203ENST00000439176 CYSTM1Q9H1C7 97 aa2.51□□□□□ -2.01
ERCC8-203ENST00000439176 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
ERCC8-203ENST00000439176 A0A1B0GU33 70 aa2.49□□□□□ -2.01
ERCC8-203ENST00000439176 MT1GP13640 62 aa2.49□□□□□ -2.01
ERCC8-203ENST00000439176 SPATA8Q6RVD6 105 aa2.48□□□□□ -2.01
ERCC8-203ENST00000439176 A8MU10 97 aa2.46□□□□□ -2.02
ERCC8-203ENST00000439176 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
ERCC8-203ENST00000439176 SMIM26A0A096LP01 95 aa2.45□□□□□ -2.02
ERCC8-203ENST00000439176 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
ERCC8-203ENST00000439176 A0A1B0GU69 56 aa2.42□□□□□ -2.02
ERCC8-203ENST00000439176 MT4P47944 62 aa2.42□□□□□ -2.02
ERCC8-203ENST00000439176 TNP1P09430 55 aa2.41□□□□□ -2.02
ERCC8-203ENST00000439176 MT1MQ8N339 61 aa2.41□□□□□ -2.02
ERCC8-203ENST00000439176 COX7CP15954 63 aa2.4□□□□□ -2.03
ERCC8-203ENST00000439176 MT1LQ93083 61 aa2.39□□□□□ -2.03
ERCC8-203ENST00000439176 H7BZZ5 65 aa2.38□□□□□ -2.03
ERCC8-203ENST00000439176 C10orf95Q9H7T3 257 aa2.38□□□□□ -2.03
ERCC8-203ENST00000439176 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
ERCC8-203ENST00000439176 PRR15LQ9BU68 103 aa2.35□□□□□ -2.03
ERCC8-203ENST00000439176 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
ERCC8-203ENST00000439176 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
ERCC8-203ENST00000439176 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
ERCC8-203ENST00000439176 ANAPC13Q9BS18 74 aa2.3□□□□□ -2.04
ERCC8-203ENST00000439176 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
ERCC8-203ENST00000439176 ATP5EP56381 51 aaPredicted RBP2.27□□□□□ -2.05
ERCC8-203ENST00000439176 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
ERCC8-203ENST00000439176 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
ERCC8-203ENST00000439176 RPS28P62857 69 aaKnown RBP2.25□□□□□ -2.05
ERCC8-203ENST00000439176 UQCR11O14957 56 aa2.24□□□□□ -2.05
ERCC8-203ENST00000439176 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
ERCC8-203ENST00000439176 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
ERCC8-203ENST00000439176 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
ERCC8-203ENST00000439176 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
ERCC8-203ENST00000439176 CCDC179H3BU77 68 aa2.22□□□□□ -2.05
ERCC8-203ENST00000439176 K7ERS5 55 aa2.22□□□□□ -2.05
ERCC8-203ENST00000439176 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
ERCC8-203ENST00000439176 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
ERCC8-203ENST00000439176 TMEM258P61165 79 aa2.19□□□□□ -2.06
ERCC8-203ENST00000439176 V9GYY9 64 aa2.19□□□□□ -2.06
ERCC8-203ENST00000439176 MIR22HGQ0VDD5 57 aa2.17□□□□□ -2.06
ERCC8-203ENST00000439176 PSPHP1O15172 72 aa2.16□□□□□ -2.06
ERCC8-203ENST00000439176 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
ERCC8-203ENST00000439176 PRO0628Q9UI54 55 aa2.11□□□□□ -2.07
ERCC8-203ENST00000439176 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
ERCC8-203ENST00000439176 MT1AP04731 61 aa2.05□□□□□ -2.08
ERCC8-203ENST00000439176 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
ERCC8-203ENST00000439176 Q1T7F1 81 aa2.03□□□□□ -2.08
ERCC8-203ENST00000439176 A6NED7 52 aa2.02□□□□□ -2.09
ERCC8-203ENST00000439176 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
ERCC8-203ENST00000439176 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
ERCC8-203ENST00000439176 BRK1Q8WUW1 75 aa2□□□□□ -2.09
ERCC8-203ENST00000439176 ROMO1P60602 79 aa1.99□□□□□ -2.09
ERCC8-203ENST00000439176 PMAIP1Q13794 54 aa1.98□□□□□ -2.09
ERCC8-203ENST00000439176 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
ERCC8-203ENST00000439176 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
ERCC8-203ENST00000439176 KTN1-AS1Q86SY8 53 aa1.91□□□□□ -2.1
ERCC8-203ENST00000439176 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
ERCC8-203ENST00000439176 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
ERCC8-203ENST00000439176 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
ERCC8-203ENST00000439176 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
ERCC8-203ENST00000439176 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
ERCC8-203ENST00000439176 INE1O15225 51 aa1.33□□□□□ -2.2
ERCC8-203ENST00000439176 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
ERCC8-203ENST00000439176 PRM1P04553 51 aa0.99□□□□□ -2.25
ERCC8-203ENST00000439176 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 116.9 ms