RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
LINC00163-202ENST00000439088 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
LINC00163-202ENST00000439088 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
LINC00163-202ENST00000439088 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
LINC00163-202ENST00000439088 KRTAP19-3Q7Z4W3 81 aa5.16□□□□□ -1.58
LINC00163-202ENST00000439088 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
LINC00163-202ENST00000439088 MT1GP13640 62 aa5.14□□□□□ -1.59
LINC00163-202ENST00000439088 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
LINC00163-202ENST00000439088 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
LINC00163-202ENST00000439088 MT1MQ8N339 61 aa5.08□□□□□ -1.6
LINC00163-202ENST00000439088 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
LINC00163-202ENST00000439088 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
LINC00163-202ENST00000439088 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
LINC00163-202ENST00000439088 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
LINC00163-202ENST00000439088 INE1O15225 51 aa4.94□□□□□ -1.62
LINC00163-202ENST00000439088 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
LINC00163-202ENST00000439088 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
LINC00163-202ENST00000439088 SPRR2EP22531 72 aa4.87□□□□□ -1.63
LINC00163-202ENST00000439088 SPRR2BP35325 72 aa4.87□□□□□ -1.63
LINC00163-202ENST00000439088 SPRR2AP35326 72 aa4.87□□□□□ -1.63
LINC00163-202ENST00000439088 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
LINC00163-202ENST00000439088 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
LINC00163-202ENST00000439088 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
LINC00163-202ENST00000439088 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
LINC00163-202ENST00000439088 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
LINC00163-202ENST00000439088 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
LINC00163-202ENST00000439088 NEBP20929 6669 aa4.68□□□□□ -1.66
LINC00163-202ENST00000439088 SPRR2DP22532 72 aa4.68□□□□□ -1.66
LINC00163-202ENST00000439088 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
LINC00163-202ENST00000439088 MT1AP04731 61 aa4.52□□□□□ -1.69
LINC00163-202ENST00000439088 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
LINC00163-202ENST00000439088 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
LINC00163-202ENST00000439088 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
LINC00163-202ENST00000439088 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
LINC00163-202ENST00000439088 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
LINC00163-202ENST00000439088 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
LINC00163-202ENST00000439088 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
LINC00163-202ENST00000439088 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
LINC00163-202ENST00000439088 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
LINC00163-202ENST00000439088 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
LINC00163-202ENST00000439088 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
LINC00163-202ENST00000439088 MT3P25713 68 aa4.09□□□□□ -1.75
LINC00163-202ENST00000439088 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
LINC00163-202ENST00000439088 MT4P47944 62 aa4.06□□□□□ -1.76
LINC00163-202ENST00000439088 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
LINC00163-202ENST00000439088 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
LINC00163-202ENST00000439088 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
LINC00163-202ENST00000439088 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
LINC00163-202ENST00000439088 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
LINC00163-202ENST00000439088 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
LINC00163-202ENST00000439088 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
LINC00163-202ENST00000439088 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
LINC00163-202ENST00000439088 PRM1P04553 51 aa3.58□□□□□ -1.84
LINC00163-202ENST00000439088 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
LINC00163-202ENST00000439088 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
LINC00163-202ENST00000439088 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
LINC00163-202ENST00000439088 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
LINC00163-202ENST00000439088 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
LINC00163-202ENST00000439088 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
LINC00163-202ENST00000439088 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
LINC00163-202ENST00000439088 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
LINC00163-202ENST00000439088 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
LINC00163-202ENST00000439088 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
LINC00163-202ENST00000439088 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
LINC00163-202ENST00000439088 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
LINC00163-202ENST00000439088 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
LINC00163-202ENST00000439088 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
LINC00163-202ENST00000439088 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
LINC00163-202ENST00000439088 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
LINC00163-202ENST00000439088 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
LINC00163-202ENST00000439088 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
LINC00163-202ENST00000439088 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
LINC00163-202ENST00000439088 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
LINC00163-202ENST00000439088 LCE1FQ5T754 118 aa2.56□□□□□ -2
LINC00163-202ENST00000439088 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
LINC00163-202ENST00000439088 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
LINC00163-202ENST00000439088 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
LINC00163-202ENST00000439088 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms