RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
TARDBP-203ENST00000439080 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
TARDBP-203ENST00000439080 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
TARDBP-203ENST00000439080 MT1EP04732 61 aa6.28□□□□□ -1.4
TARDBP-203ENST00000439080 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
TARDBP-203ENST00000439080 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
TARDBP-203ENST00000439080 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
TARDBP-203ENST00000439080 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
TARDBP-203ENST00000439080 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
TARDBP-203ENST00000439080 SPRR2DP22532 72 aa6.22□□□□□ -1.41
TARDBP-203ENST00000439080 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
TARDBP-203ENST00000439080 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.43
TARDBP-203ENST00000439080 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
TARDBP-203ENST00000439080 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
TARDBP-203ENST00000439080 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
TARDBP-203ENST00000439080 ROMO1P60602 79 aa6.07□□□□□ -1.44
TARDBP-203ENST00000439080 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
TARDBP-203ENST00000439080 MT1LQ93083 61 aa6.05□□□□□ -1.44
TARDBP-203ENST00000439080 KRTAP4-2Q9BYR5 136 aa6.03□□□□□ -1.44
TARDBP-203ENST00000439080 MT1GP13640 62 aa6.02□□□□□ -1.45
TARDBP-203ENST00000439080 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
TARDBP-203ENST00000439080 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.45
TARDBP-203ENST00000439080 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.45
TARDBP-203ENST00000439080 MT1MQ8N339 61 aa5.95□□□□□ -1.46
TARDBP-203ENST00000439080 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
TARDBP-203ENST00000439080 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
TARDBP-203ENST00000439080 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
TARDBP-203ENST00000439080 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
TARDBP-203ENST00000439080 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
TARDBP-203ENST00000439080 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
TARDBP-203ENST00000439080 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
TARDBP-203ENST00000439080 PMAIP1Q13794 54 aa5.58□□□□□ -1.52
TARDBP-203ENST00000439080 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
TARDBP-203ENST00000439080 KRTAP5-5Q701N2 237 aaPredicted RBP5.43□□□□□ -1.54
TARDBP-203ENST00000439080 MT4P47944 62 aa5.42□□□□□ -1.54
TARDBP-203ENST00000439080 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
TARDBP-203ENST00000439080 HMCN1Q96RW7 5635 aa5.36□□□□□ -1.55
TARDBP-203ENST00000439080 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
TARDBP-203ENST00000439080 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
TARDBP-203ENST00000439080 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
TARDBP-203ENST00000439080 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
TARDBP-203ENST00000439080 MT1AP04731 61 aa5.15□□□□□ -1.59
TARDBP-203ENST00000439080 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
TARDBP-203ENST00000439080 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.59
TARDBP-203ENST00000439080 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
TARDBP-203ENST00000439080 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
TARDBP-203ENST00000439080 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
TARDBP-203ENST00000439080 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
TARDBP-203ENST00000439080 AHNAK2Q8IVF2 5795 aa5.03□□□□□ -1.6
TARDBP-203ENST00000439080 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
TARDBP-203ENST00000439080 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
TARDBP-203ENST00000439080 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
TARDBP-203ENST00000439080 MT3P25713 68 aa4.69□□□□□ -1.66
TARDBP-203ENST00000439080 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
TARDBP-203ENST00000439080 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
TARDBP-203ENST00000439080 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
TARDBP-203ENST00000439080 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
TARDBP-203ENST00000439080 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
TARDBP-203ENST00000439080 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
TARDBP-203ENST00000439080 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
TARDBP-203ENST00000439080 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
TARDBP-203ENST00000439080 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
TARDBP-203ENST00000439080 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
TARDBP-203ENST00000439080 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
TARDBP-203ENST00000439080 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
TARDBP-203ENST00000439080 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
TARDBP-203ENST00000439080 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
TARDBP-203ENST00000439080 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
TARDBP-203ENST00000439080 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
TARDBP-203ENST00000439080 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.78
TARDBP-203ENST00000439080 INE1O15225 51 aa3.55□□□□□ -1.84
TARDBP-203ENST00000439080 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
TARDBP-203ENST00000439080 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
TARDBP-203ENST00000439080 PRM1P04553 51 aa3.14□□□□□ -1.91
TARDBP-203ENST00000439080 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
TARDBP-203ENST00000439080 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
TARDBP-203ENST00000439080 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
TARDBP-203ENST00000439080 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms