RNA–Protein interactions for RNA: ENST00000438874.6

TSG101-202, Transcript of tumor susceptibility 101, humanhuman

TSL 1 (best)

Gene TSG101, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-202ENST00000438874 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
TSG101-202ENST00000438874 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
TSG101-202ENST00000438874 A0A1B0GU69 56 aa6.44□□□□□ -1.38
TSG101-202ENST00000438874 TNP1P09430 55 aa6.44□□□□□ -1.38
TSG101-202ENST00000438874 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
TSG101-202ENST00000438874 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
TSG101-202ENST00000438874 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
TSG101-202ENST00000438874 KRTAP5-7Q6L8G8 165 aa6.22□□□□□ -1.41
TSG101-202ENST00000438874 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
TSG101-202ENST00000438874 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
TSG101-202ENST00000438874 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
TSG101-202ENST00000438874 H3BS24 57 aa6.15□□□□□ -1.42
TSG101-202ENST00000438874 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
TSG101-202ENST00000438874 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
TSG101-202ENST00000438874 ANAPC13Q9BS18 74 aa6.08□□□□□ -1.44
TSG101-202ENST00000438874 LINC01558Q9Y6Z2 57 aa6.06□□□□□ -1.44
TSG101-202ENST00000438874 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
TSG101-202ENST00000438874 ATP5EP56381 51 aaPredicted RBP6.02□□□□□ -1.45
TSG101-202ENST00000438874 CCDC179H3BU77 68 aa6.01□□□□□ -1.45
TSG101-202ENST00000438874 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
TSG101-202ENST00000438874 UQCR11O14957 56 aa5.96□□□□□ -1.46
TSG101-202ENST00000438874 KRTAP25-1Q3LHN0 102 aa5.96□□□□□ -1.46
TSG101-202ENST00000438874 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
TSG101-202ENST00000438874 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
TSG101-202ENST00000438874 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
TSG101-202ENST00000438874 TMEM258P61165 79 aa5.75□□□□□ -1.49
TSG101-202ENST00000438874 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
TSG101-202ENST00000438874 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
TSG101-202ENST00000438874 KRTAP5-2Q701N4 177 aa5.72□□□□□ -1.49
TSG101-202ENST00000438874 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
TSG101-202ENST00000438874 K7ERS5 55 aa5.7□□□□□ -1.5
TSG101-202ENST00000438874 MT1AP04731 61 aa5.66□□□□□ -1.5
TSG101-202ENST00000438874 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
TSG101-202ENST00000438874 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.5
TSG101-202ENST00000438874 KRTAP5-8O75690 187 aa5.54□□□□□ -1.52
TSG101-202ENST00000438874 PSPHP1O15172 72 aa5.53□□□□□ -1.52
TSG101-202ENST00000438874 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
TSG101-202ENST00000438874 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
TSG101-202ENST00000438874 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
TSG101-202ENST00000438874 V9GYY9 64 aa5.48□□□□□ -1.53
TSG101-202ENST00000438874 MUC5ACP98088 5654 aa5.48□□□□□ -1.53
TSG101-202ENST00000438874 Q1T7F1 81 aa5.46□□□□□ -1.54
TSG101-202ENST00000438874 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
TSG101-202ENST00000438874 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
TSG101-202ENST00000438874 PCP4P48539 62 aa5.44□□□□□ -1.54
TSG101-202ENST00000438874 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
TSG101-202ENST00000438874 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
TSG101-202ENST00000438874 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
TSG101-202ENST00000438874 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
TSG101-202ENST00000438874 A6NED7 52 aa5.31□□□□□ -1.56
TSG101-202ENST00000438874 ROMO1P60602 79 aa5.3□□□□□ -1.56
TSG101-202ENST00000438874 MT3P25713 68 aa5.17□□□□□ -1.58
TSG101-202ENST00000438874 KRTAP5-1Q6L8H4 278 aa5.17□□□□□ -1.58
TSG101-202ENST00000438874 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
TSG101-202ENST00000438874 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
TSG101-202ENST00000438874 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
TSG101-202ENST00000438874 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
TSG101-202ENST00000438874 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
TSG101-202ENST00000438874 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
TSG101-202ENST00000438874 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
TSG101-202ENST00000438874 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
TSG101-202ENST00000438874 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
TSG101-202ENST00000438874 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
TSG101-202ENST00000438874 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
TSG101-202ENST00000438874 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
TSG101-202ENST00000438874 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
TSG101-202ENST00000438874 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
TSG101-202ENST00000438874 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
TSG101-202ENST00000438874 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
TSG101-202ENST00000438874 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
TSG101-202ENST00000438874 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
TSG101-202ENST00000438874 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
TSG101-202ENST00000438874 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
TSG101-202ENST00000438874 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
TSG101-202ENST00000438874 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
TSG101-202ENST00000438874 PRM1P04553 51 aa2.7□□□□□ -1.98
TSG101-202ENST00000438874 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
TSG101-202ENST00000438874 INE1O15225 51 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 111.2 ms