RNA–Protein interactions for RNA: ENST00000438748.5

POLR1B-208, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-208ENST00000438748 SPRR2DP22532 72 aa4.55□□□□□ -1.68
POLR1B-208ENST00000438748 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
POLR1B-208ENST00000438748 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
POLR1B-208ENST00000438748 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
POLR1B-208ENST00000438748 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
POLR1B-208ENST00000438748 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
POLR1B-208ENST00000438748 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
POLR1B-208ENST00000438748 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
POLR1B-208ENST00000438748 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
POLR1B-208ENST00000438748 MT1LQ93083 61 aa4.44□□□□□ -1.7
POLR1B-208ENST00000438748 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
POLR1B-208ENST00000438748 MT1GP13640 62 aa4.42□□□□□ -1.7
POLR1B-208ENST00000438748 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
POLR1B-208ENST00000438748 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
POLR1B-208ENST00000438748 MT1MQ8N339 61 aa4.36□□□□□ -1.71
POLR1B-208ENST00000438748 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
POLR1B-208ENST00000438748 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
POLR1B-208ENST00000438748 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
POLR1B-208ENST00000438748 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
POLR1B-208ENST00000438748 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
POLR1B-208ENST00000438748 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
POLR1B-208ENST00000438748 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
POLR1B-208ENST00000438748 H3BS24 57 aa4.18□□□□□ -1.74
POLR1B-208ENST00000438748 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
POLR1B-208ENST00000438748 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
POLR1B-208ENST00000438748 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
POLR1B-208ENST00000438748 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
POLR1B-208ENST00000438748 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
POLR1B-208ENST00000438748 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
POLR1B-208ENST00000438748 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
POLR1B-208ENST00000438748 MT4P47944 62 aa3.95□□□□□ -1.78
POLR1B-208ENST00000438748 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
POLR1B-208ENST00000438748 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
POLR1B-208ENST00000438748 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
POLR1B-208ENST00000438748 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
POLR1B-208ENST00000438748 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
POLR1B-208ENST00000438748 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
POLR1B-208ENST00000438748 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
POLR1B-208ENST00000438748 MT1AP04731 61 aa3.79□□□□□ -1.8
POLR1B-208ENST00000438748 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
POLR1B-208ENST00000438748 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
POLR1B-208ENST00000438748 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
POLR1B-208ENST00000438748 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
POLR1B-208ENST00000438748 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
POLR1B-208ENST00000438748 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
POLR1B-208ENST00000438748 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
POLR1B-208ENST00000438748 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
POLR1B-208ENST00000438748 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
POLR1B-208ENST00000438748 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
POLR1B-208ENST00000438748 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
POLR1B-208ENST00000438748 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
POLR1B-208ENST00000438748 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
POLR1B-208ENST00000438748 MT3P25713 68 aa3.47□□□□□ -1.85
POLR1B-208ENST00000438748 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
POLR1B-208ENST00000438748 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
POLR1B-208ENST00000438748 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
POLR1B-208ENST00000438748 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
POLR1B-208ENST00000438748 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
POLR1B-208ENST00000438748 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
POLR1B-208ENST00000438748 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
POLR1B-208ENST00000438748 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
POLR1B-208ENST00000438748 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
POLR1B-208ENST00000438748 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
POLR1B-208ENST00000438748 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
POLR1B-208ENST00000438748 INE1O15225 51 aa2.93□□□□□ -1.94
POLR1B-208ENST00000438748 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
POLR1B-208ENST00000438748 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
POLR1B-208ENST00000438748 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
POLR1B-208ENST00000438748 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
POLR1B-208ENST00000438748 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
POLR1B-208ENST00000438748 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
POLR1B-208ENST00000438748 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
POLR1B-208ENST00000438748 PRM1P04553 51 aa2.4□□□□□ -2.03
POLR1B-208ENST00000438748 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
POLR1B-208ENST00000438748 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
POLR1B-208ENST00000438748 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
POLR1B-208ENST00000438748 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
POLR1B-208ENST00000438748 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 26 ms