RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 MT1HP80294 61 aa2.73□□□□□ -1.97
SPEN-202ENST00000438066 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
SPEN-202ENST00000438066 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
SPEN-202ENST00000438066 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
SPEN-202ENST00000438066 CRIPTQ9P021 101 aa2.68□□□□□ -1.98
SPEN-202ENST00000438066 M0R2T5 61 aa2.67□□□□□ -1.98
SPEN-202ENST00000438066 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
SPEN-202ENST00000438066 MT2AP02795 61 aa2.65□□□□□ -1.99
SPEN-202ENST00000438066 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
SPEN-202ENST00000438066 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
SPEN-202ENST00000438066 MT1FP04733 61 aa2.63□□□□□ -1.99
SPEN-202ENST00000438066 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
SPEN-202ENST00000438066 C10orf95Q9H7T3 257 aa2.58□□□□□ -2
SPEN-202ENST00000438066 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
SPEN-202ENST00000438066 MT1BP07438 61 aa2.52□□□□□ -2.01
SPEN-202ENST00000438066 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
SPEN-202ENST00000438066 TNP1P09430 55 aa2.45□□□□□ -2.02
SPEN-202ENST00000438066 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
SPEN-202ENST00000438066 MT1XP80297 61 aa2.45□□□□□ -2.02
SPEN-202ENST00000438066 INE1O15225 51 aa2.4□□□□□ -2.02
SPEN-202ENST00000438066 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
SPEN-202ENST00000438066 CRCT1Q9UGL9 99 aa2.35□□□□□ -2.03
SPEN-202ENST00000438066 USH2AO75445 5202 aa2.35□□□□□ -2.03
SPEN-202ENST00000438066 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
SPEN-202ENST00000438066 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.04
SPEN-202ENST00000438066 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.04
SPEN-202ENST00000438066 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
SPEN-202ENST00000438066 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
SPEN-202ENST00000438066 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
SPEN-202ENST00000438066 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.05
SPEN-202ENST00000438066 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
SPEN-202ENST00000438066 KRTAP19-5Q3LI72 72 aa2.22□□□□□ -2.05
SPEN-202ENST00000438066 KMT2DO14686 5537 aa2.2□□□□□ -2.06
SPEN-202ENST00000438066 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
SPEN-202ENST00000438066 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
SPEN-202ENST00000438066 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
SPEN-202ENST00000438066 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
SPEN-202ENST00000438066 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
SPEN-202ENST00000438066 MT1EP04732 61 aa2.14□□□□□ -2.07
SPEN-202ENST00000438066 MT1LQ93083 61 aa2.11□□□□□ -2.07
SPEN-202ENST00000438066 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
SPEN-202ENST00000438066 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
SPEN-202ENST00000438066 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
SPEN-202ENST00000438066 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
SPEN-202ENST00000438066 SPRR2FQ96RM1 72 aa2.03□□□□□ -2.09
SPEN-202ENST00000438066 MT1GP13640 62 aa2.02□□□□□ -2.09
SPEN-202ENST00000438066 MUC12Q9UKN1 5478 aa2.02□□□□□ -2.09
SPEN-202ENST00000438066 MT1MQ8N339 61 aa2.01□□□□□ -2.09
SPEN-202ENST00000438066 SPRR2EP22531 72 aa1.96□□□□□ -2.1
SPEN-202ENST00000438066 SPRR2BP35325 72 aa1.96□□□□□ -2.1
SPEN-202ENST00000438066 SPRR2AP35326 72 aa1.96□□□□□ -2.1
SPEN-202ENST00000438066 MDN1Q9NU22 5596 aa1.92□□□□□ -2.1
SPEN-202ENST00000438066 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
SPEN-202ENST00000438066 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
SPEN-202ENST00000438066 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
SPEN-202ENST00000438066 NEBP20929 6669 aa1.9□□□□□ -2.1
SPEN-202ENST00000438066 SPRR2DP22532 72 aa1.9□□□□□ -2.11
SPEN-202ENST00000438066 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
SPEN-202ENST00000438066 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
SPEN-202ENST00000438066 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
SPEN-202ENST00000438066 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
SPEN-202ENST00000438066 MT1AP04731 61 aa1.79□□□□□ -2.12
SPEN-202ENST00000438066 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
SPEN-202ENST00000438066 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
SPEN-202ENST00000438066 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
SPEN-202ENST00000438066 MT4P47944 62 aa1.63□□□□□ -2.15
SPEN-202ENST00000438066 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
SPEN-202ENST00000438066 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
SPEN-202ENST00000438066 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
SPEN-202ENST00000438066 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
SPEN-202ENST00000438066 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
SPEN-202ENST00000438066 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
SPEN-202ENST00000438066 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
SPEN-202ENST00000438066 PRM1P04553 51 aa1.4□□□□□ -2.18
SPEN-202ENST00000438066 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
SPEN-202ENST00000438066 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
SPEN-202ENST00000438066 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
SPEN-202ENST00000438066 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms