RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CCDC179H3BU77 68 aa4.68□□□□□ -1.66
SMAD9-IT1-201ENST00000437983 H7BZZ5 65 aa4.68□□□□□ -1.66
SMAD9-IT1-201ENST00000437983 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
SMAD9-IT1-201ENST00000437983 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
SMAD9-IT1-201ENST00000437983 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
SMAD9-IT1-201ENST00000437983 COA5Q86WW8 74 aa4.63□□□□□ -1.67
SMAD9-IT1-201ENST00000437983 PSPHP1O15172 72 aa4.61□□□□□ -1.67
SMAD9-IT1-201ENST00000437983 P0C880 135 aa4.61□□□□□ -1.67
SMAD9-IT1-201ENST00000437983 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
SMAD9-IT1-201ENST00000437983 MT1EP04732 61 aa4.59□□□□□ -1.67
SMAD9-IT1-201ENST00000437983 M0QZ58 72 aa4.53□□□□□ -1.68
SMAD9-IT1-201ENST00000437983 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
SMAD9-IT1-201ENST00000437983 R4GN34 69 aa4.53□□□□□ -1.68
SMAD9-IT1-201ENST00000437983 ATP5EP56381 51 aaPredicted RBP4.51□□□□□ -1.69
SMAD9-IT1-201ENST00000437983 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
SMAD9-IT1-201ENST00000437983 TMEM258P61165 79 aa4.48□□□□□ -1.69
SMAD9-IT1-201ENST00000437983 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
SMAD9-IT1-201ENST00000437983 MT1GP13640 62 aa4.46□□□□□ -1.7
SMAD9-IT1-201ENST00000437983 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
SMAD9-IT1-201ENST00000437983 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
SMAD9-IT1-201ENST00000437983 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
SMAD9-IT1-201ENST00000437983 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
SMAD9-IT1-201ENST00000437983 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
SMAD9-IT1-201ENST00000437983 MT1MQ8N339 61 aa4.42□□□□□ -1.7
SMAD9-IT1-201ENST00000437983 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
SMAD9-IT1-201ENST00000437983 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
SMAD9-IT1-201ENST00000437983 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
SMAD9-IT1-201ENST00000437983 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
SMAD9-IT1-201ENST00000437983 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
SMAD9-IT1-201ENST00000437983 A0A1B0GU69 56 aa4.38□□□□□ -1.71
SMAD9-IT1-201ENST00000437983 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
SMAD9-IT1-201ENST00000437983 A0A1B0GU33 70 aa4.35□□□□□ -1.71
SMAD9-IT1-201ENST00000437983 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
SMAD9-IT1-201ENST00000437983 A0A0D9SG42 100 aa4.31□□□□□ -1.72
SMAD9-IT1-201ENST00000437983 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
SMAD9-IT1-201ENST00000437983 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
SMAD9-IT1-201ENST00000437983 PRR15LQ9BU68 103 aa4.3□□□□□ -1.72
SMAD9-IT1-201ENST00000437983 MT1LQ93083 61 aa4.26□□□□□ -1.73
SMAD9-IT1-201ENST00000437983 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
SMAD9-IT1-201ENST00000437983 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
SMAD9-IT1-201ENST00000437983 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SMAD9-IT1-201ENST00000437983 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
SMAD9-IT1-201ENST00000437983 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
SMAD9-IT1-201ENST00000437983 UQCR11O14957 56 aa4.16□□□□□ -1.74
SMAD9-IT1-201ENST00000437983 Q1T7F1 81 aa4.16□□□□□ -1.74
SMAD9-IT1-201ENST00000437983 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
SMAD9-IT1-201ENST00000437983 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
SMAD9-IT1-201ENST00000437983 RPS28P62857 69 aaKnown RBP4.13□□□□□ -1.75
SMAD9-IT1-201ENST00000437983 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
SMAD9-IT1-201ENST00000437983 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
SMAD9-IT1-201ENST00000437983 K7ERS5 55 aa4.07□□□□□ -1.76
SMAD9-IT1-201ENST00000437983 A6NED7 52 aa4.04□□□□□ -1.76
SMAD9-IT1-201ENST00000437983 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
SMAD9-IT1-201ENST00000437983 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
SMAD9-IT1-201ENST00000437983 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
SMAD9-IT1-201ENST00000437983 TNP1P09430 55 aa3.92□□□□□ -1.78
SMAD9-IT1-201ENST00000437983 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
SMAD9-IT1-201ENST00000437983 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
SMAD9-IT1-201ENST00000437983 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
SMAD9-IT1-201ENST00000437983 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
SMAD9-IT1-201ENST00000437983 ROMO1P60602 79 aa3.75□□□□□ -1.81
SMAD9-IT1-201ENST00000437983 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
SMAD9-IT1-201ENST00000437983 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
SMAD9-IT1-201ENST00000437983 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
SMAD9-IT1-201ENST00000437983 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
SMAD9-IT1-201ENST00000437983 MT1AP04731 61 aa3.59□□□□□ -1.83
SMAD9-IT1-201ENST00000437983 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
SMAD9-IT1-201ENST00000437983 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
SMAD9-IT1-201ENST00000437983 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
SMAD9-IT1-201ENST00000437983 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
SMAD9-IT1-201ENST00000437983 PHGR1C9JFL3 82 aa3□□□□□ -1.93
SMAD9-IT1-201ENST00000437983 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SMAD9-IT1-201ENST00000437983 INE1O15225 51 aa2.46□□□□□ -2.02
SMAD9-IT1-201ENST00000437983 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SMAD9-IT1-201ENST00000437983 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
SMAD9-IT1-201ENST00000437983 PRM1P04553 51 aa1.95□□□□□ -2.1
SMAD9-IT1-201ENST00000437983 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 96.5 ms