RNA–Protein interactions for RNA: ENST00000437597.1

LINC00884-201, long intergenic non-protein coding RNA 884, humanhuman

TSL 3

Gene LINC00884, Length 419 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-201ENST00000437597 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
LINC00884-201ENST00000437597 SPATA8Q6RVD6 105 aa3.66□□□□□ -1.82
LINC00884-201ENST00000437597 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
LINC00884-201ENST00000437597 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
LINC00884-201ENST00000437597 A0A0D9SG42 100 aa3.64□□□□□ -1.83
LINC00884-201ENST00000437597 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
LINC00884-201ENST00000437597 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
LINC00884-201ENST00000437597 MT1GP13640 62 aa3.61□□□□□ -1.83
LINC00884-201ENST00000437597 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
LINC00884-201ENST00000437597 MT1MQ8N339 61 aa3.57□□□□□ -1.84
LINC00884-201ENST00000437597 V9GYY9 64 aa3.57□□□□□ -1.84
LINC00884-201ENST00000437597 UQCR11O14957 56 aa3.56□□□□□ -1.84
LINC00884-201ENST00000437597 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
LINC00884-201ENST00000437597 A8MU10 97 aa3.54□□□□□ -1.84
LINC00884-201ENST00000437597 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
LINC00884-201ENST00000437597 Q1T7F1 81 aa3.5□□□□□ -1.85
LINC00884-201ENST00000437597 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
LINC00884-201ENST00000437597 PCP4P48539 62 aa3.46□□□□□ -1.86
LINC00884-201ENST00000437597 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
LINC00884-201ENST00000437597 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
LINC00884-201ENST00000437597 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
LINC00884-201ENST00000437597 TNP1P09430 55 aa3.44□□□□□ -1.86
LINC00884-201ENST00000437597 K7ERS5 55 aa3.43□□□□□ -1.86
LINC00884-201ENST00000437597 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
LINC00884-201ENST00000437597 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
LINC00884-201ENST00000437597 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
LINC00884-201ENST00000437597 PSPHP1O15172 72 aa3.42□□□□□ -1.86
LINC00884-201ENST00000437597 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
LINC00884-201ENST00000437597 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
LINC00884-201ENST00000437597 MT1LQ93083 61 aa3.42□□□□□ -1.86
LINC00884-201ENST00000437597 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
LINC00884-201ENST00000437597 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
LINC00884-201ENST00000437597 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
LINC00884-201ENST00000437597 A6NED7 52 aa3.35□□□□□ -1.87
LINC00884-201ENST00000437597 KRTAP25-1Q3LHN0 102 aa3.33□□□□□ -1.88
LINC00884-201ENST00000437597 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
LINC00884-201ENST00000437597 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
LINC00884-201ENST00000437597 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
LINC00884-201ENST00000437597 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
LINC00884-201ENST00000437597 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
LINC00884-201ENST00000437597 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
LINC00884-201ENST00000437597 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
LINC00884-201ENST00000437597 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
LINC00884-201ENST00000437597 ROMO1P60602 79 aa3.18□□□□□ -1.9
LINC00884-201ENST00000437597 KRTAP15-1Q3LI76 137 aa3.07□□□□□ -1.92
LINC00884-201ENST00000437597 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
LINC00884-201ENST00000437597 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
LINC00884-201ENST00000437597 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
LINC00884-201ENST00000437597 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
LINC00884-201ENST00000437597 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
LINC00884-201ENST00000437597 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
LINC00884-201ENST00000437597 MT1AP04731 61 aa2.9□□□□□ -1.95
LINC00884-201ENST00000437597 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
LINC00884-201ENST00000437597 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
LINC00884-201ENST00000437597 PRO0628Q9UI54 55 aa2.75□□□□□ -1.97
LINC00884-201ENST00000437597 MT3P25713 68 aa2.66□□□□□ -1.98
LINC00884-201ENST00000437597 PRAC1Q96KF2 57 aa2.64□□□□□ -1.99
LINC00884-201ENST00000437597 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
LINC00884-201ENST00000437597 KTN1-AS1Q86SY8 53 aa2.59□□□□□ -1.99
LINC00884-201ENST00000437597 SVIPQ8NHG7 77 aa2.52□□□□□ -2.01
LINC00884-201ENST00000437597 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
LINC00884-201ENST00000437597 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
LINC00884-201ENST00000437597 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
LINC00884-201ENST00000437597 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
LINC00884-201ENST00000437597 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
LINC00884-201ENST00000437597 A0A0A0MQY5 61 aa2.33□□□□□ -2.04
LINC00884-201ENST00000437597 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
LINC00884-201ENST00000437597 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
LINC00884-201ENST00000437597 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
LINC00884-201ENST00000437597 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
LINC00884-201ENST00000437597 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
LINC00884-201ENST00000437597 NDUFAF8A1L188 74 aa2□□□□□ -2.09
LINC00884-201ENST00000437597 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
LINC00884-201ENST00000437597 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
LINC00884-201ENST00000437597 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
LINC00884-201ENST00000437597 INE1O15225 51 aa1.62□□□□□ -2.15
LINC00884-201ENST00000437597 PRM1P04553 51 aa1.6□□□□□ -2.15
LINC00884-201ENST00000437597 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 55.3 ms