RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 MT1LQ93083 61 aa7.65□□□□□ -1.18
SDHAP3-201ENST00000436493 MT1MQ8N339 61 aa7.59□□□□□ -1.19
SDHAP3-201ENST00000436493 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
SDHAP3-201ENST00000436493 A6NED7 52 aa7.56□□□□□ -1.2
SDHAP3-201ENST00000436493 DSTQ03001 7570 aaKnown RBP7.55□□□□□ -1.2
SDHAP3-201ENST00000436493 PCP4P48539 62 aa7.54□□□□□ -1.2
SDHAP3-201ENST00000436493 KRTAP12-3P60328 96 aa7.53□□□□□ -1.2
SDHAP3-201ENST00000436493 RPS28P62857 69 aaKnown RBP7.51□□□□□ -1.21
SDHAP3-201ENST00000436493 KRTAP4-3Q9BYR4 195 aa7.39□□□□□ -1.23
SDHAP3-201ENST00000436493 KRTAP4-9Q9BYQ8 210 aa7.35□□□□□ -1.23
SDHAP3-201ENST00000436493 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
SDHAP3-201ENST00000436493 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
SDHAP3-201ENST00000436493 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
SDHAP3-201ENST00000436493 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
SDHAP3-201ENST00000436493 ROMO1P60602 79 aa7.19□□□□□ -1.26
SDHAP3-201ENST00000436493 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
SDHAP3-201ENST00000436493 MT4P47944 62 aa7.16□□□□□ -1.26
SDHAP3-201ENST00000436493 KRTAP19-4Q3LI73 84 aa7.13□□□□□ -1.27
SDHAP3-201ENST00000436493 KRTAP5-4Q6L8H1 288 aa7.11□□□□□ -1.27
SDHAP3-201ENST00000436493 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
SDHAP3-201ENST00000436493 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
SDHAP3-201ENST00000436493 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
SDHAP3-201ENST00000436493 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
SDHAP3-201ENST00000436493 KRTAP5-5Q701N2 237 aaPredicted RBP6.91□□□□□ -1.3
SDHAP3-201ENST00000436493 GPR98Q8WXG9 6306 aa6.9□□□□□ -1.3
SDHAP3-201ENST00000436493 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
SDHAP3-201ENST00000436493 KRTAP12-4P60329 112 aa6.77□□□□□ -1.33
SDHAP3-201ENST00000436493 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
SDHAP3-201ENST00000436493 KRTAP20-2Q3LI61 65 aa6.72□□□□□ -1.33
SDHAP3-201ENST00000436493 AHNAK2Q8IVF2 5795 aa6.69□□□□□ -1.34
SDHAP3-201ENST00000436493 BRK1Q8WUW1 75 aa6.64□□□□□ -1.35
SDHAP3-201ENST00000436493 KRTAP5-10Q6L8G5 202 aa6.57□□□□□ -1.36
SDHAP3-201ENST00000436493 MT1AP04731 61 aa6.52□□□□□ -1.37
SDHAP3-201ENST00000436493 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.37
SDHAP3-201ENST00000436493 KRTAP5-3Q6L8H2 238 aa6.5□□□□□ -1.37
SDHAP3-201ENST00000436493 KRTAP9-6A8MVA2 160 aa6.49□□□□□ -1.37
SDHAP3-201ENST00000436493 KRTAP6-1Q3LI64 71 aa6.46□□□□□ -1.38
SDHAP3-201ENST00000436493 SVIPQ8NHG7 77 aa6.46□□□□□ -1.38
SDHAP3-201ENST00000436493 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
SDHAP3-201ENST00000436493 KRTAP9-4Q9BYQ2 154 aa6.29□□□□□ -1.4
SDHAP3-201ENST00000436493 KRTAP5-2Q701N4 177 aa6.26□□□□□ -1.41
SDHAP3-201ENST00000436493 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
SDHAP3-201ENST00000436493 KRTAP6-2Q3LI66 62 aa6.15□□□□□ -1.42
SDHAP3-201ENST00000436493 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
SDHAP3-201ENST00000436493 MT3P25713 68 aa5.99□□□□□ -1.45
SDHAP3-201ENST00000436493 PRAC1Q96KF2 57 aa5.96□□□□□ -1.46
SDHAP3-201ENST00000436493 KRTAP5-8O75690 187 aa5.87□□□□□ -1.47
SDHAP3-201ENST00000436493 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
SDHAP3-201ENST00000436493 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
SDHAP3-201ENST00000436493 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
SDHAP3-201ENST00000436493 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
SDHAP3-201ENST00000436493 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
SDHAP3-201ENST00000436493 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
SDHAP3-201ENST00000436493 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
SDHAP3-201ENST00000436493 MUC5ACP98088 5654 aa5.45□□□□□ -1.54
SDHAP3-201ENST00000436493 LCE1EQ5T753 118 aa5.44□□□□□ -1.54
SDHAP3-201ENST00000436493 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
SDHAP3-201ENST00000436493 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
SDHAP3-201ENST00000436493 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
SDHAP3-201ENST00000436493 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
SDHAP3-201ENST00000436493 LCE1CQ5T751 118 aa5.04□□□□□ -1.6
SDHAP3-201ENST00000436493 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
SDHAP3-201ENST00000436493 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
SDHAP3-201ENST00000436493 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
SDHAP3-201ENST00000436493 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
SDHAP3-201ENST00000436493 H3BS24 57 aa4.41□□□□□ -1.7
SDHAP3-201ENST00000436493 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
SDHAP3-201ENST00000436493 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
SDHAP3-201ENST00000436493 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
SDHAP3-201ENST00000436493 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
SDHAP3-201ENST00000436493 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
SDHAP3-201ENST00000436493 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
SDHAP3-201ENST00000436493 PRM1P04553 51 aa3.67□□□□□ -1.82
SDHAP3-201ENST00000436493 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
SDHAP3-201ENST00000436493 INE1O15225 51 aa3.36□□□□□ -1.87
SDHAP3-201ENST00000436493 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
SDHAP3-201ENST00000436493 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 150 ms