RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 COA5Q86WW8 74 aa3.8□□□□□ -1.8
SPTLC1P4-201ENST00000435997 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
SPTLC1P4-201ENST00000435997 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
SPTLC1P4-201ENST00000435997 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
SPTLC1P4-201ENST00000435997 SEC61GP60059 68 aa3.76□□□□□ -1.81
SPTLC1P4-201ENST00000435997 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
SPTLC1P4-201ENST00000435997 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
SPTLC1P4-201ENST00000435997 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
SPTLC1P4-201ENST00000435997 SERP1Q9Y6X1 66 aa3.76□□□□□ -1.81
SPTLC1P4-201ENST00000435997 A0A1B0GU33 70 aa3.75□□□□□ -1.81
SPTLC1P4-201ENST00000435997 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
SPTLC1P4-201ENST00000435997 K7ERU9 68 aa3.71□□□□□ -1.82
SPTLC1P4-201ENST00000435997 TNP1P09430 55 aa3.67□□□□□ -1.82
SPTLC1P4-201ENST00000435997 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
SPTLC1P4-201ENST00000435997 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
SPTLC1P4-201ENST00000435997 SMIM26A0A096LP01 95 aa3.64□□□□□ -1.83
SPTLC1P4-201ENST00000435997 A8MU10 97 aa3.64□□□□□ -1.83
SPTLC1P4-201ENST00000435997 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
SPTLC1P4-201ENST00000435997 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
SPTLC1P4-201ENST00000435997 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
SPTLC1P4-201ENST00000435997 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
SPTLC1P4-201ENST00000435997 H7BZZ5 65 aa3.59□□□□□ -1.83
SPTLC1P4-201ENST00000435997 A0A1B0GU69 56 aa3.58□□□□□ -1.84
SPTLC1P4-201ENST00000435997 COX7CP15954 63 aa3.55□□□□□ -1.84
SPTLC1P4-201ENST00000435997 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
SPTLC1P4-201ENST00000435997 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
SPTLC1P4-201ENST00000435997 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
SPTLC1P4-201ENST00000435997 PRR15LQ9BU68 103 aa3.39□□□□□ -1.87
SPTLC1P4-201ENST00000435997 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
SPTLC1P4-201ENST00000435997 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
SPTLC1P4-201ENST00000435997 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
SPTLC1P4-201ENST00000435997 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
SPTLC1P4-201ENST00000435997 MT1AP04731 61 aa3.31□□□□□ -1.88
SPTLC1P4-201ENST00000435997 UQCR11O14957 56 aa3.29□□□□□ -1.88
SPTLC1P4-201ENST00000435997 ATP5EP56381 51 aaPredicted RBP3.29□□□□□ -1.88
SPTLC1P4-201ENST00000435997 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
SPTLC1P4-201ENST00000435997 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
SPTLC1P4-201ENST00000435997 ANAPC13Q9BS18 74 aa3.27□□□□□ -1.89
SPTLC1P4-201ENST00000435997 CCDC179H3BU77 68 aa3.25□□□□□ -1.89
SPTLC1P4-201ENST00000435997 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
SPTLC1P4-201ENST00000435997 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
SPTLC1P4-201ENST00000435997 MIR22HGQ0VDD5 57 aa3.19□□□□□ -1.9
SPTLC1P4-201ENST00000435997 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
SPTLC1P4-201ENST00000435997 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SPTLC1P4-201ENST00000435997 K7ERS5 55 aa3.13□□□□□ -1.91
SPTLC1P4-201ENST00000435997 MT3P25713 68 aa3.12□□□□□ -1.91
SPTLC1P4-201ENST00000435997 TMEM258P61165 79 aa3.12□□□□□ -1.91
SPTLC1P4-201ENST00000435997 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
SPTLC1P4-201ENST00000435997 SVIPQ8NHG7 77 aa3.01□□□□□ -1.93
SPTLC1P4-201ENST00000435997 PSPHP1O15172 72 aa3□□□□□ -1.93
SPTLC1P4-201ENST00000435997 Q1T7F1 81 aa2.98□□□□□ -1.93
SPTLC1P4-201ENST00000435997 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
SPTLC1P4-201ENST00000435997 V9GYY9 64 aa2.96□□□□□ -1.94
SPTLC1P4-201ENST00000435997 RPS28P62857 69 aaKnown RBP2.95□□□□□ -1.94
SPTLC1P4-201ENST00000435997 ROMO1P60602 79 aa2.92□□□□□ -1.94
SPTLC1P4-201ENST00000435997 A6NED7 52 aa2.87□□□□□ -1.95
SPTLC1P4-201ENST00000435997 PCP4P48539 62 aa2.78□□□□□ -1.96
SPTLC1P4-201ENST00000435997 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
SPTLC1P4-201ENST00000435997 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
SPTLC1P4-201ENST00000435997 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
SPTLC1P4-201ENST00000435997 LCE1FQ5T754 118 aa2.53□□□□□ -2
SPTLC1P4-201ENST00000435997 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
SPTLC1P4-201ENST00000435997 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
SPTLC1P4-201ENST00000435997 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
SPTLC1P4-201ENST00000435997 PRAC1Q96KF2 57 aa2.23□□□□□ -2.05
SPTLC1P4-201ENST00000435997 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SPTLC1P4-201ENST00000435997 BRK1Q8WUW1 75 aa2.17□□□□□ -2.06
SPTLC1P4-201ENST00000435997 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
SPTLC1P4-201ENST00000435997 NDUFAF8A1L188 74 aa2.14□□□□□ -2.07
SPTLC1P4-201ENST00000435997 PMAIP1Q13794 54 aa2.01□□□□□ -2.09
SPTLC1P4-201ENST00000435997 LUZP6Q538Z0 58 aa1.72□□□□□ -2.13
SPTLC1P4-201ENST00000435997 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SPTLC1P4-201ENST00000435997 KTN1-AS1Q86SY8 53 aa1.65□□□□□ -2.15
SPTLC1P4-201ENST00000435997 PRO0628Q9UI54 55 aa1.63□□□□□ -2.15
SPTLC1P4-201ENST00000435997 PRM1P04553 51 aa1.48□□□□□ -2.17
SPTLC1P4-201ENST00000435997 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
SPTLC1P4-201ENST00000435997 INE1O15225 51 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 30.6 ms