RNA–Protein interactions for RNA: ENST00000435827.6

NUDC-202, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

TSL 5

Gene NUDC, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-202ENST00000435827 LCE4AQ5TA78 99 aa7.88□□□□□ -1.15
NUDC-202ENST00000435827 MT4P47944 62 aa7.78□□□□□ -1.16
NUDC-202ENST00000435827 HMCN1Q96RW7 5635 aa7.78□□□□□ -1.16
NUDC-202ENST00000435827 TMEM258P61165 79 aa7.74□□□□□ -1.17
NUDC-202ENST00000435827 UQCR11O14957 56 aa7.72□□□□□ -1.17
NUDC-202ENST00000435827 KRTAP4-3Q9BYR4 195 aa7.72□□□□□ -1.17
NUDC-202ENST00000435827 KRTAP5-4Q6L8H1 288 aa7.66□□□□□ -1.18
NUDC-202ENST00000435827 KRTAP12-3P60328 96 aa7.65□□□□□ -1.18
NUDC-202ENST00000435827 AHNAK2Q8IVF2 5795 aa7.59□□□□□ -1.2
NUDC-202ENST00000435827 MIR22HGQ0VDD5 57 aa7.53□□□□□ -1.2
NUDC-202ENST00000435827 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
NUDC-202ENST00000435827 KRTAP4-7Q9BYR0 210 aa7.52□□□□□ -1.21
NUDC-202ENST00000435827 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
NUDC-202ENST00000435827 KRTAP5-10Q6L8G5 202 aa7.48□□□□□ -1.21
NUDC-202ENST00000435827 K7ERS5 55 aa7.41□□□□□ -1.22
NUDC-202ENST00000435827 V9GYY9 64 aa7.37□□□□□ -1.23
NUDC-202ENST00000435827 PCP4P48539 62 aa7.35□□□□□ -1.23
NUDC-202ENST00000435827 KRTAP5-5Q701N2 237 aaPredicted RBP7.31□□□□□ -1.24
NUDC-202ENST00000435827 PSPHP1O15172 72 aa7.3□□□□□ -1.24
NUDC-202ENST00000435827 Q1T7F1 81 aa7.3□□□□□ -1.24
NUDC-202ENST00000435827 KRTAP19-4Q3LI73 84 aa7.3□□□□□ -1.24
NUDC-202ENST00000435827 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
NUDC-202ENST00000435827 KRTAP5-3Q6L8H2 238 aa7.26□□□□□ -1.25
NUDC-202ENST00000435827 KRTAP20-2Q3LI61 65 aa7.25□□□□□ -1.25
NUDC-202ENST00000435827 KRTAP5-7Q6L8G8 165 aa7.24□□□□□ -1.25
NUDC-202ENST00000435827 SPRR5A0A1B0GTR4 108 aa7.22□□□□□ -1.25
NUDC-202ENST00000435827 KRTAP12-4P60329 112 aa7.15□□□□□ -1.26
NUDC-202ENST00000435827 LOC100996750A0A140TA64 210 aa7.14□□□□□ -1.27
NUDC-202ENST00000435827 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
NUDC-202ENST00000435827 A6NED7 52 aa7.06□□□□□ -1.28
NUDC-202ENST00000435827 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
NUDC-202ENST00000435827 LCE3CQ5T5A8 94 aa7.04□□□□□ -1.28
NUDC-202ENST00000435827 CDC42SE1Q9NRR8 79 aa6.99□□□□□ -1.29
NUDC-202ENST00000435827 ROMO1P60602 79 aa6.89□□□□□ -1.31
NUDC-202ENST00000435827 RPS28P62857 69 aaKnown RBP6.84□□□□□ -1.31
NUDC-202ENST00000435827 MT1AP04731 61 aa6.78□□□□□ -1.32
NUDC-202ENST00000435827 KRTAP6-1Q3LI64 71 aa6.72□□□□□ -1.33
NUDC-202ENST00000435827 KRTAP5-2Q701N4 177 aa6.68□□□□□ -1.34
NUDC-202ENST00000435827 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
NUDC-202ENST00000435827 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
NUDC-202ENST00000435827 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
NUDC-202ENST00000435827 KRTAP5-8O75690 187 aa6.45□□□□□ -1.38
NUDC-202ENST00000435827 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
NUDC-202ENST00000435827 OBSCNQ5VST9 7968 aa6.37□□□□□ -1.39
NUDC-202ENST00000435827 MUC5ACP98088 5654 aa6.3□□□□□ -1.4
NUDC-202ENST00000435827 AHNAKQ09666 5890 aaKnown RBP6.28□□□□□ -1.4
NUDC-202ENST00000435827 MUC5BQ9HC84 5762 aaPredicted RBP6.26□□□□□ -1.41
NUDC-202ENST00000435827 MT3P25713 68 aa6.22□□□□□ -1.41
NUDC-202ENST00000435827 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
NUDC-202ENST00000435827 KRTAP5-1Q6L8H4 278 aa6.01□□□□□ -1.45
NUDC-202ENST00000435827 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
NUDC-202ENST00000435827 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
NUDC-202ENST00000435827 LCE1EQ5T753 118 aa5.74□□□□□ -1.49
NUDC-202ENST00000435827 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
NUDC-202ENST00000435827 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
NUDC-202ENST00000435827 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
NUDC-202ENST00000435827 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
NUDC-202ENST00000435827 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
NUDC-202ENST00000435827 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
NUDC-202ENST00000435827 LCE1CQ5T751 118 aa5.32□□□□□ -1.56
NUDC-202ENST00000435827 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
NUDC-202ENST00000435827 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
NUDC-202ENST00000435827 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
NUDC-202ENST00000435827 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
NUDC-202ENST00000435827 LCE1FQ5T754 118 aa4.77□□□□□ -1.65
NUDC-202ENST00000435827 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
NUDC-202ENST00000435827 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
NUDC-202ENST00000435827 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
NUDC-202ENST00000435827 PHGR1C9JFL3 82 aa4.37□□□□□ -1.71
NUDC-202ENST00000435827 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
NUDC-202ENST00000435827 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
NUDC-202ENST00000435827 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
NUDC-202ENST00000435827 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
NUDC-202ENST00000435827 H3BS24 57 aa3.59□□□□□ -1.83
NUDC-202ENST00000435827 INE1O15225 51 aa3.55□□□□□ -1.84
NUDC-202ENST00000435827 PRM1P04553 51 aa3.49□□□□□ -1.85
NUDC-202ENST00000435827 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
NUDC-202ENST00000435827 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms