RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 TNP1P09430 55 aa6.6□□□□□ -1.35
CLOCK-203ENST00000435527 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
CLOCK-203ENST00000435527 MT1GP13640 62 aa6.52□□□□□ -1.37
CLOCK-203ENST00000435527 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
CLOCK-203ENST00000435527 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
CLOCK-203ENST00000435527 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
CLOCK-203ENST00000435527 MIR22HGQ0VDD5 57 aa6.48□□□□□ -1.37
CLOCK-203ENST00000435527 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
CLOCK-203ENST00000435527 MT1LQ93083 61 aa6.46□□□□□ -1.38
CLOCK-203ENST00000435527 V9GYY9 64 aa6.45□□□□□ -1.38
CLOCK-203ENST00000435527 Q1T7F1 81 aa6.44□□□□□ -1.38
CLOCK-203ENST00000435527 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
CLOCK-203ENST00000435527 PSPHP1O15172 72 aa6.41□□□□□ -1.38
CLOCK-203ENST00000435527 MT1MQ8N339 61 aa6.41□□□□□ -1.38
CLOCK-203ENST00000435527 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
CLOCK-203ENST00000435527 K7ERS5 55 aa6.3□□□□□ -1.4
CLOCK-203ENST00000435527 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
CLOCK-203ENST00000435527 KRTAP25-1Q3LHN0 102 aa6.29□□□□□ -1.4
CLOCK-203ENST00000435527 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
CLOCK-203ENST00000435527 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
CLOCK-203ENST00000435527 A6NED7 52 aa6.18□□□□□ -1.42
CLOCK-203ENST00000435527 PCP4P48539 62 aa6.16□□□□□ -1.42
CLOCK-203ENST00000435527 H3BS24 57 aa6.11□□□□□ -1.43
CLOCK-203ENST00000435527 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
CLOCK-203ENST00000435527 KRTAP5-4Q6L8H1 288 aa6.07□□□□□ -1.44
CLOCK-203ENST00000435527 MT4P47944 62 aa6.03□□□□□ -1.44
CLOCK-203ENST00000435527 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
CLOCK-203ENST00000435527 HMCN1Q96RW7 5635 aa5.98□□□□□ -1.45
CLOCK-203ENST00000435527 ROMO1P60602 79 aa5.93□□□□□ -1.46
CLOCK-203ENST00000435527 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
CLOCK-203ENST00000435527 GPR98Q8WXG9 6306 aa5.91□□□□□ -1.46
CLOCK-203ENST00000435527 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
CLOCK-203ENST00000435527 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
CLOCK-203ENST00000435527 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
CLOCK-203ENST00000435527 AHNAK2Q8IVF2 5795 aa5.7□□□□□ -1.5
CLOCK-203ENST00000435527 KRTAP20-2Q3LI61 65 aa5.7□□□□□ -1.5
CLOCK-203ENST00000435527 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
CLOCK-203ENST00000435527 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
CLOCK-203ENST00000435527 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
CLOCK-203ENST00000435527 KRTAP5-10Q6L8G5 202 aa5.62□□□□□ -1.51
CLOCK-203ENST00000435527 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
CLOCK-203ENST00000435527 MT1AP04731 61 aa5.49□□□□□ -1.53
CLOCK-203ENST00000435527 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
CLOCK-203ENST00000435527 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
CLOCK-203ENST00000435527 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
CLOCK-203ENST00000435527 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
CLOCK-203ENST00000435527 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
CLOCK-203ENST00000435527 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
CLOCK-203ENST00000435527 MT3P25713 68 aa5.02□□□□□ -1.61
CLOCK-203ENST00000435527 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
CLOCK-203ENST00000435527 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
CLOCK-203ENST00000435527 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
CLOCK-203ENST00000435527 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
CLOCK-203ENST00000435527 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
CLOCK-203ENST00000435527 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
CLOCK-203ENST00000435527 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
CLOCK-203ENST00000435527 AHNAKQ09666 5890 aaKnown RBP4.65□□□□□ -1.66
CLOCK-203ENST00000435527 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
CLOCK-203ENST00000435527 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
CLOCK-203ENST00000435527 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
CLOCK-203ENST00000435527 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
CLOCK-203ENST00000435527 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
CLOCK-203ENST00000435527 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
CLOCK-203ENST00000435527 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
CLOCK-203ENST00000435527 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
CLOCK-203ENST00000435527 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
CLOCK-203ENST00000435527 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
CLOCK-203ENST00000435527 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
CLOCK-203ENST00000435527 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
CLOCK-203ENST00000435527 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
CLOCK-203ENST00000435527 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
CLOCK-203ENST00000435527 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
CLOCK-203ENST00000435527 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
CLOCK-203ENST00000435527 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
CLOCK-203ENST00000435527 PRM1P04553 51 aa3.03□□□□□ -1.92
CLOCK-203ENST00000435527 INE1O15225 51 aa2.68□□□□□ -1.98
CLOCK-203ENST00000435527 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
CLOCK-203ENST00000435527 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms