RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
HLA-DQB1-205ENST00000434651 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
HLA-DQB1-205ENST00000434651 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
HLA-DQB1-205ENST00000434651 SPRR2EP22531 72 aa5.73□□□□□ -1.49
HLA-DQB1-205ENST00000434651 SPRR2BP35325 72 aa5.73□□□□□ -1.49
HLA-DQB1-205ENST00000434651 SPRR2AP35326 72 aa5.73□□□□□ -1.49
HLA-DQB1-205ENST00000434651 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
HLA-DQB1-205ENST00000434651 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
HLA-DQB1-205ENST00000434651 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
HLA-DQB1-205ENST00000434651 TNP1P09430 55 aa5.62□□□□□ -1.51
HLA-DQB1-205ENST00000434651 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
HLA-DQB1-205ENST00000434651 MT1EP04732 61 aa5.59□□□□□ -1.51
HLA-DQB1-205ENST00000434651 KRTAP20-1Q3LI63 56 aa5.54□□□□□ -1.52
HLA-DQB1-205ENST00000434651 SPRR2DP22532 72 aa5.52□□□□□ -1.53
HLA-DQB1-205ENST00000434651 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
HLA-DQB1-205ENST00000434651 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
HLA-DQB1-205ENST00000434651 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
HLA-DQB1-205ENST00000434651 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
HLA-DQB1-205ENST00000434651 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
HLA-DQB1-205ENST00000434651 MT1LQ93083 61 aa5.39□□□□□ -1.55
HLA-DQB1-205ENST00000434651 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
HLA-DQB1-205ENST00000434651 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
HLA-DQB1-205ENST00000434651 MT1GP13640 62 aa5.32□□□□□ -1.56
HLA-DQB1-205ENST00000434651 MT1MQ8N339 61 aa5.3□□□□□ -1.56
HLA-DQB1-205ENST00000434651 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
HLA-DQB1-205ENST00000434651 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
HLA-DQB1-205ENST00000434651 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
HLA-DQB1-205ENST00000434651 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
HLA-DQB1-205ENST00000434651 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
HLA-DQB1-205ENST00000434651 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
HLA-DQB1-205ENST00000434651 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
HLA-DQB1-205ENST00000434651 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
HLA-DQB1-205ENST00000434651 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
HLA-DQB1-205ENST00000434651 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
HLA-DQB1-205ENST00000434651 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
HLA-DQB1-205ENST00000434651 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
HLA-DQB1-205ENST00000434651 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
HLA-DQB1-205ENST00000434651 MT4P47944 62 aa4.87□□□□□ -1.63
HLA-DQB1-205ENST00000434651 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
HLA-DQB1-205ENST00000434651 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
HLA-DQB1-205ENST00000434651 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
HLA-DQB1-205ENST00000434651 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
HLA-DQB1-205ENST00000434651 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
HLA-DQB1-205ENST00000434651 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
HLA-DQB1-205ENST00000434651 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.67
HLA-DQB1-205ENST00000434651 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
HLA-DQB1-205ENST00000434651 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
HLA-DQB1-205ENST00000434651 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
HLA-DQB1-205ENST00000434651 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
HLA-DQB1-205ENST00000434651 MT1AP04731 61 aa4.55□□□□□ -1.68
HLA-DQB1-205ENST00000434651 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
HLA-DQB1-205ENST00000434651 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
HLA-DQB1-205ENST00000434651 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
HLA-DQB1-205ENST00000434651 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
HLA-DQB1-205ENST00000434651 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
HLA-DQB1-205ENST00000434651 MT3P25713 68 aa4.12□□□□□ -1.75
HLA-DQB1-205ENST00000434651 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
HLA-DQB1-205ENST00000434651 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
HLA-DQB1-205ENST00000434651 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
HLA-DQB1-205ENST00000434651 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
HLA-DQB1-205ENST00000434651 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
HLA-DQB1-205ENST00000434651 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
HLA-DQB1-205ENST00000434651 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
HLA-DQB1-205ENST00000434651 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
HLA-DQB1-205ENST00000434651 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
HLA-DQB1-205ENST00000434651 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
HLA-DQB1-205ENST00000434651 PRM1P04553 51 aa3.52□□□□□ -1.85
HLA-DQB1-205ENST00000434651 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
HLA-DQB1-205ENST00000434651 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
HLA-DQB1-205ENST00000434651 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
HLA-DQB1-205ENST00000434651 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
HLA-DQB1-205ENST00000434651 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
HLA-DQB1-205ENST00000434651 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
HLA-DQB1-205ENST00000434651 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
HLA-DQB1-205ENST00000434651 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
HLA-DQB1-205ENST00000434651 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
HLA-DQB1-205ENST00000434651 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 30.6 ms