RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 A8MU10 97 aa7.1□□□□□ -1.27
HLA-B-250ENST00000434333 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
HLA-B-250ENST00000434333 LCE4AQ5TA78 99 aa7.09□□□□□ -1.27
HLA-B-250ENST00000434333 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
HLA-B-250ENST00000434333 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
HLA-B-250ENST00000434333 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
HLA-B-250ENST00000434333 MT4P47944 62 aa7.03□□□□□ -1.28
HLA-B-250ENST00000434333 KRTAP4-3Q9BYR4 195 aa7.03□□□□□ -1.28
HLA-B-250ENST00000434333 TNP1P09430 55 aa6.98□□□□□ -1.29
HLA-B-250ENST00000434333 KRTAP5-4Q6L8H1 288 aa6.97□□□□□ -1.29
HLA-B-250ENST00000434333 PSPHP1O15172 72 aa6.94□□□□□ -1.3
HLA-B-250ENST00000434333 UQCR11O14957 56 aa6.89□□□□□ -1.31
HLA-B-250ENST00000434333 AHNAK2Q8IVF2 5795 aa6.86□□□□□ -1.31
HLA-B-250ENST00000434333 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
HLA-B-250ENST00000434333 A6NED7 52 aa6.83□□□□□ -1.32
HLA-B-250ENST00000434333 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
HLA-B-250ENST00000434333 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
HLA-B-250ENST00000434333 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
HLA-B-250ENST00000434333 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
HLA-B-250ENST00000434333 KRTAP5-10Q6L8G5 202 aa6.76□□□□□ -1.33
HLA-B-250ENST00000434333 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
HLA-B-250ENST00000434333 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
HLA-B-250ENST00000434333 KRTAP5-5Q701N2 237 aaPredicted RBP6.63□□□□□ -1.35
HLA-B-250ENST00000434333 K7ERS5 55 aa6.6□□□□□ -1.35
HLA-B-250ENST00000434333 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
HLA-B-250ENST00000434333 KRTAP20-2Q3LI61 65 aa6.57□□□□□ -1.36
HLA-B-250ENST00000434333 KRTAP5-3Q6L8H2 238 aa6.56□□□□□ -1.36
HLA-B-250ENST00000434333 SPRR5A0A1B0GTR4 108 aa6.5□□□□□ -1.37
HLA-B-250ENST00000434333 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
HLA-B-250ENST00000434333 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
HLA-B-250ENST00000434333 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
HLA-B-250ENST00000434333 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.38
HLA-B-250ENST00000434333 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
HLA-B-250ENST00000434333 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
HLA-B-250ENST00000434333 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
HLA-B-250ENST00000434333 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
HLA-B-250ENST00000434333 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
HLA-B-250ENST00000434333 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
HLA-B-250ENST00000434333 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
HLA-B-250ENST00000434333 ROMO1P60602 79 aa6.19□□□□□ -1.42
HLA-B-250ENST00000434333 MT1AP04731 61 aa6.08□□□□□ -1.44
HLA-B-250ENST00000434333 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
HLA-B-250ENST00000434333 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
HLA-B-250ENST00000434333 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
HLA-B-250ENST00000434333 KRTAP9-6A8MVA2 160 aa5.94□□□□□ -1.46
HLA-B-250ENST00000434333 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
HLA-B-250ENST00000434333 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
HLA-B-250ENST00000434333 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
HLA-B-250ENST00000434333 AHNAKQ09666 5890 aaKnown RBP5.82□□□□□ -1.48
HLA-B-250ENST00000434333 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
HLA-B-250ENST00000434333 OBSCNQ5VST9 7968 aa5.79□□□□□ -1.48
HLA-B-250ENST00000434333 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
HLA-B-250ENST00000434333 MUC5BQ9HC84 5762 aaPredicted RBP5.7□□□□□ -1.5
HLA-B-250ENST00000434333 MT3P25713 68 aa5.54□□□□□ -1.52
HLA-B-250ENST00000434333 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
HLA-B-250ENST00000434333 KRTAP5-1Q6L8H4 278 aa5.48□□□□□ -1.53
HLA-B-250ENST00000434333 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
HLA-B-250ENST00000434333 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
HLA-B-250ENST00000434333 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
HLA-B-250ENST00000434333 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
HLA-B-250ENST00000434333 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
HLA-B-250ENST00000434333 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
HLA-B-250ENST00000434333 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
HLA-B-250ENST00000434333 H3BS24 57 aa4.46□□□□□ -1.7
HLA-B-250ENST00000434333 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
HLA-B-250ENST00000434333 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
HLA-B-250ENST00000434333 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
HLA-B-250ENST00000434333 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
HLA-B-250ENST00000434333 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
HLA-B-250ENST00000434333 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
HLA-B-250ENST00000434333 INE1O15225 51 aa4.11□□□□□ -1.75
HLA-B-250ENST00000434333 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
HLA-B-250ENST00000434333 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
HLA-B-250ENST00000434333 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
HLA-B-250ENST00000434333 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
HLA-B-250ENST00000434333 PRM1P04553 51 aa3.17□□□□□ -1.9
HLA-B-250ENST00000434333 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
HLA-B-250ENST00000434333 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 75.9 ms