RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 USH2AO75445 5202 aa3.07□□□□□ -1.92
GTF2A1-202ENST00000434192 SPATA8Q6RVD6 105 aa3.06□□□□□ -1.92
GTF2A1-202ENST00000434192 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
GTF2A1-202ENST00000434192 MIR22HGQ0VDD5 57 aa3.04□□□□□ -1.92
GTF2A1-202ENST00000434192 A0A0D9SG42 100 aa3.02□□□□□ -1.93
GTF2A1-202ENST00000434192 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
GTF2A1-202ENST00000434192 KRTAP19-6Q3LI70 58 aa2.99□□□□□ -1.93
GTF2A1-202ENST00000434192 FCGBPQ9Y6R7 5405 aaPredicted RBP2.97□□□□□ -1.93
GTF2A1-202ENST00000434192 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
GTF2A1-202ENST00000434192 K7ERS5 55 aa2.96□□□□□ -1.94
GTF2A1-202ENST00000434192 MT1BP07438 61 aa2.96□□□□□ -1.94
GTF2A1-202ENST00000434192 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
GTF2A1-202ENST00000434192 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
GTF2A1-202ENST00000434192 ROMO1P60602 79 aa2.95□□□□□ -1.94
GTF2A1-202ENST00000434192 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
GTF2A1-202ENST00000434192 CAMK2N1Q7Z7J9 78 aa2.93□□□□□ -1.94
GTF2A1-202ENST00000434192 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
GTF2A1-202ENST00000434192 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
GTF2A1-202ENST00000434192 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
GTF2A1-202ENST00000434192 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
GTF2A1-202ENST00000434192 MT1XP80297 61 aa2.85□□□□□ -1.95
GTF2A1-202ENST00000434192 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
GTF2A1-202ENST00000434192 SYNE2Q8WXH0 6885 aaKnown RBP2.83□□□□□ -1.96
GTF2A1-202ENST00000434192 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
GTF2A1-202ENST00000434192 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
GTF2A1-202ENST00000434192 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
GTF2A1-202ENST00000434192 TNP1P09430 55 aa2.76□□□□□ -1.97
GTF2A1-202ENST00000434192 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
GTF2A1-202ENST00000434192 KMT2DO14686 5537 aa2.7□□□□□ -1.98
GTF2A1-202ENST00000434192 NEBP20929 6669 aa2.68□□□□□ -1.98
GTF2A1-202ENST00000434192 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
GTF2A1-202ENST00000434192 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
GTF2A1-202ENST00000434192 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
GTF2A1-202ENST00000434192 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
GTF2A1-202ENST00000434192 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
GTF2A1-202ENST00000434192 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
GTF2A1-202ENST00000434192 SPRR2EP22531 72 aa2.58□□□□□ -2
GTF2A1-202ENST00000434192 SPRR2BP35325 72 aa2.58□□□□□ -2
GTF2A1-202ENST00000434192 SPRR2AP35326 72 aa2.58□□□□□ -2
GTF2A1-202ENST00000434192 MDN1Q9NU22 5596 aa2.55□□□□□ -2
GTF2A1-202ENST00000434192 KRTAP19-5Q3LI72 72 aa2.55□□□□□ -2
GTF2A1-202ENST00000434192 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
GTF2A1-202ENST00000434192 KRTAP12-3P60328 96 aa2.54□□□□□ -2
GTF2A1-202ENST00000434192 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
GTF2A1-202ENST00000434192 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
GTF2A1-202ENST00000434192 MT1EP04732 61 aa2.51□□□□□ -2.01
GTF2A1-202ENST00000434192 SPRR2DP22532 72 aa2.49□□□□□ -2.01
GTF2A1-202ENST00000434192 KRTAP2-1Q9BYU5 128 aa2.46□□□□□ -2.02
GTF2A1-202ENST00000434192 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
GTF2A1-202ENST00000434192 MT1LQ93083 61 aa2.44□□□□□ -2.02
GTF2A1-202ENST00000434192 MT1GP13640 62 aa2.4□□□□□ -2.03
GTF2A1-202ENST00000434192 MT1MQ8N339 61 aa2.37□□□□□ -2.03
GTF2A1-202ENST00000434192 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
GTF2A1-202ENST00000434192 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
GTF2A1-202ENST00000434192 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
GTF2A1-202ENST00000434192 DSTQ03001 7570 aaKnown RBP2.3□□□□□ -2.04
GTF2A1-202ENST00000434192 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
GTF2A1-202ENST00000434192 INE1O15225 51 aa2.21□□□□□ -2.06
GTF2A1-202ENST00000434192 MT4P47944 62 aa2.17□□□□□ -2.06
GTF2A1-202ENST00000434192 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
GTF2A1-202ENST00000434192 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
GTF2A1-202ENST00000434192 MT1AP04731 61 aa2.09□□□□□ -2.07
GTF2A1-202ENST00000434192 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
GTF2A1-202ENST00000434192 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
GTF2A1-202ENST00000434192 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
GTF2A1-202ENST00000434192 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
GTF2A1-202ENST00000434192 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
GTF2A1-202ENST00000434192 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
GTF2A1-202ENST00000434192 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
GTF2A1-202ENST00000434192 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
GTF2A1-202ENST00000434192 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
GTF2A1-202ENST00000434192 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
GTF2A1-202ENST00000434192 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
GTF2A1-202ENST00000434192 PRM1P04553 51 aa1.44□□□□□ -2.18
GTF2A1-202ENST00000434192 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
GTF2A1-202ENST00000434192 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
GTF2A1-202ENST00000434192 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms