RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
CTCFL-209ENST00000433949 KMT2DO14686 5537 aa4.66□□□□□ -1.66
CTCFL-209ENST00000433949 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.66
CTCFL-209ENST00000433949 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.66
CTCFL-209ENST00000433949 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
CTCFL-209ENST00000433949 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
CTCFL-209ENST00000433949 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
CTCFL-209ENST00000433949 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
CTCFL-209ENST00000433949 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
CTCFL-209ENST00000433949 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
CTCFL-209ENST00000433949 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
CTCFL-209ENST00000433949 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
CTCFL-209ENST00000433949 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
CTCFL-209ENST00000433949 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
CTCFL-209ENST00000433949 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
CTCFL-209ENST00000433949 MT1EP04732 61 aa4.22□□□□□ -1.73
CTCFL-209ENST00000433949 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
CTCFL-209ENST00000433949 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
CTCFL-209ENST00000433949 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
CTCFL-209ENST00000433949 MT1LQ93083 61 aa4.19□□□□□ -1.74
CTCFL-209ENST00000433949 INE1O15225 51 aa4.17□□□□□ -1.74
CTCFL-209ENST00000433949 SPRR2EP22531 72 aa4.09□□□□□ -1.75
CTCFL-209ENST00000433949 SPRR2BP35325 72 aa4.09□□□□□ -1.75
CTCFL-209ENST00000433949 SPRR2AP35326 72 aa4.09□□□□□ -1.75
CTCFL-209ENST00000433949 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
CTCFL-209ENST00000433949 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
CTCFL-209ENST00000433949 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
CTCFL-209ENST00000433949 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
CTCFL-209ENST00000433949 NEBP20929 6669 aa4.04□□□□□ -1.76
CTCFL-209ENST00000433949 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
CTCFL-209ENST00000433949 MT1GP13640 62 aa4.02□□□□□ -1.77
CTCFL-209ENST00000433949 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
CTCFL-209ENST00000433949 MT1MQ8N339 61 aa3.96□□□□□ -1.78
CTCFL-209ENST00000433949 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
CTCFL-209ENST00000433949 SPRR2DP22532 72 aa3.94□□□□□ -1.78
CTCFL-209ENST00000433949 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
CTCFL-209ENST00000433949 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
CTCFL-209ENST00000433949 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
CTCFL-209ENST00000433949 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
CTCFL-209ENST00000433949 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
CTCFL-209ENST00000433949 MT1AP04731 61 aa3.56□□□□□ -1.84
CTCFL-209ENST00000433949 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
CTCFL-209ENST00000433949 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
CTCFL-209ENST00000433949 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
CTCFL-209ENST00000433949 MT4P47944 62 aa3.48□□□□□ -1.85
CTCFL-209ENST00000433949 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
CTCFL-209ENST00000433949 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
CTCFL-209ENST00000433949 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
CTCFL-209ENST00000433949 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
CTCFL-209ENST00000433949 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
CTCFL-209ENST00000433949 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
CTCFL-209ENST00000433949 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
CTCFL-209ENST00000433949 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
CTCFL-209ENST00000433949 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
CTCFL-209ENST00000433949 MT3P25713 68 aa3.23□□□□□ -1.89
CTCFL-209ENST00000433949 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
CTCFL-209ENST00000433949 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
CTCFL-209ENST00000433949 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
CTCFL-209ENST00000433949 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
CTCFL-209ENST00000433949 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
CTCFL-209ENST00000433949 PRM1P04553 51 aa2.95□□□□□ -1.94
CTCFL-209ENST00000433949 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
CTCFL-209ENST00000433949 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.96
CTCFL-209ENST00000433949 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CTCFL-209ENST00000433949 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
CTCFL-209ENST00000433949 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
CTCFL-209ENST00000433949 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
CTCFL-209ENST00000433949 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
CTCFL-209ENST00000433949 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
CTCFL-209ENST00000433949 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
CTCFL-209ENST00000433949 LCE1CQ5T751 118 aa2.56□□□□□ -2
CTCFL-209ENST00000433949 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
CTCFL-209ENST00000433949 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
CTCFL-209ENST00000433949 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
CTCFL-209ENST00000433949 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
CTCFL-209ENST00000433949 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
CTCFL-209ENST00000433949 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 14.7 ms