RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-205ENST00000433369 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
PTPN12-205ENST00000433369 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
PTPN12-205ENST00000433369 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
PTPN12-205ENST00000433369 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
PTPN12-205ENST00000433369 MT1GP13640 62 aa4.53□□□□□ -1.68
PTPN12-205ENST00000433369 MT1LQ93083 61 aa4.52□□□□□ -1.69
PTPN12-205ENST00000433369 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
PTPN12-205ENST00000433369 TNP1P09430 55 aa4.49□□□□□ -1.69
PTPN12-205ENST00000433369 MT1MQ8N339 61 aa4.49□□□□□ -1.69
PTPN12-205ENST00000433369 TMEM258P61165 79 aa4.48□□□□□ -1.69
PTPN12-205ENST00000433369 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
PTPN12-205ENST00000433369 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
PTPN12-205ENST00000433369 UQCR11O14957 56 aa4.4□□□□□ -1.71
PTPN12-205ENST00000433369 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
PTPN12-205ENST00000433369 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
PTPN12-205ENST00000433369 MT4P47944 62 aa4.31□□□□□ -1.72
PTPN12-205ENST00000433369 PSPHP1O15172 72 aa4.28□□□□□ -1.72
PTPN12-205ENST00000433369 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
PTPN12-205ENST00000433369 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
PTPN12-205ENST00000433369 Q1T7F1 81 aa4.23□□□□□ -1.73
PTPN12-205ENST00000433369 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
PTPN12-205ENST00000433369 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
PTPN12-205ENST00000433369 V9GYY9 64 aa4.22□□□□□ -1.73
PTPN12-205ENST00000433369 K7ERS5 55 aa4.17□□□□□ -1.74
PTPN12-205ENST00000433369 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
PTPN12-205ENST00000433369 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
PTPN12-205ENST00000433369 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
PTPN12-205ENST00000433369 A6NED7 52 aa4.09□□□□□ -1.75
PTPN12-205ENST00000433369 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
PTPN12-205ENST00000433369 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
PTPN12-205ENST00000433369 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
PTPN12-205ENST00000433369 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
PTPN12-205ENST00000433369 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
PTPN12-205ENST00000433369 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
PTPN12-205ENST00000433369 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
PTPN12-205ENST00000433369 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
PTPN12-205ENST00000433369 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
PTPN12-205ENST00000433369 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
PTPN12-205ENST00000433369 ROMO1P60602 79 aa3.95□□□□□ -1.78
PTPN12-205ENST00000433369 PCP4P48539 62 aa3.93□□□□□ -1.78
PTPN12-205ENST00000433369 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
PTPN12-205ENST00000433369 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
PTPN12-205ENST00000433369 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
PTPN12-205ENST00000433369 MT1AP04731 61 aa3.82□□□□□ -1.8
PTPN12-205ENST00000433369 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
PTPN12-205ENST00000433369 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
PTPN12-205ENST00000433369 SVIPQ8NHG7 77 aa3.6□□□□□ -1.83
PTPN12-205ENST00000433369 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
PTPN12-205ENST00000433369 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
PTPN12-205ENST00000433369 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
PTPN12-205ENST00000433369 MT3P25713 68 aa3.47□□□□□ -1.85
PTPN12-205ENST00000433369 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
PTPN12-205ENST00000433369 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
PTPN12-205ENST00000433369 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PTPN12-205ENST00000433369 PMAIP1Q13794 54 aa3.28□□□□□ -1.88
PTPN12-205ENST00000433369 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
PTPN12-205ENST00000433369 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
PTPN12-205ENST00000433369 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
PTPN12-205ENST00000433369 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-205ENST00000433369 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
PTPN12-205ENST00000433369 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
PTPN12-205ENST00000433369 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
PTPN12-205ENST00000433369 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
PTPN12-205ENST00000433369 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
PTPN12-205ENST00000433369 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
PTPN12-205ENST00000433369 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
PTPN12-205ENST00000433369 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
PTPN12-205ENST00000433369 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
PTPN12-205ENST00000433369 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
PTPN12-205ENST00000433369 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
PTPN12-205ENST00000433369 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
PTPN12-205ENST00000433369 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
PTPN12-205ENST00000433369 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
PTPN12-205ENST00000433369 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
PTPN12-205ENST00000433369 PRM1P04553 51 aa2.05□□□□□ -2.08
PTPN12-205ENST00000433369 INE1O15225 51 aa1.75□□□□□ -2.13
PTPN12-205ENST00000433369 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
PTPN12-205ENST00000433369 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 56.6 ms