RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
SF1-209ENST00000433274 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
SF1-209ENST00000433274 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
SF1-209ENST00000433274 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
SF1-209ENST00000433274 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
SF1-209ENST00000433274 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
SF1-209ENST00000433274 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
SF1-209ENST00000433274 MT1GP13640 62 aa5.14□□□□□ -1.59
SF1-209ENST00000433274 MT1MQ8N339 61 aa5.12□□□□□ -1.59
SF1-209ENST00000433274 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
SF1-209ENST00000433274 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
SF1-209ENST00000433274 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
SF1-209ENST00000433274 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
SF1-209ENST00000433274 MDN1Q9NU22 5596 aa4.99□□□□□ -1.61
SF1-209ENST00000433274 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
SF1-209ENST00000433274 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.61
SF1-209ENST00000433274 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
SF1-209ENST00000433274 SPRR2EP22531 72 aa4.94□□□□□ -1.62
SF1-209ENST00000433274 SPRR2BP35325 72 aa4.94□□□□□ -1.62
SF1-209ENST00000433274 SPRR2AP35326 72 aa4.94□□□□□ -1.62
SF1-209ENST00000433274 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.62
SF1-209ENST00000433274 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
SF1-209ENST00000433274 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
SF1-209ENST00000433274 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
SF1-209ENST00000433274 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
SF1-209ENST00000433274 SPRR2DP22532 72 aa4.74□□□□□ -1.65
SF1-209ENST00000433274 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
SF1-209ENST00000433274 NEBP20929 6669 aa4.56□□□□□ -1.68
SF1-209ENST00000433274 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
SF1-209ENST00000433274 MT1AP04731 61 aa4.54□□□□□ -1.68
SF1-209ENST00000433274 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
SF1-209ENST00000433274 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
SF1-209ENST00000433274 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
SF1-209ENST00000433274 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
SF1-209ENST00000433274 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
SF1-209ENST00000433274 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
SF1-209ENST00000433274 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
SF1-209ENST00000433274 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
SF1-209ENST00000433274 MT4P47944 62 aa4.16□□□□□ -1.74
SF1-209ENST00000433274 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SF1-209ENST00000433274 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
SF1-209ENST00000433274 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
SF1-209ENST00000433274 MT3P25713 68 aa4.1□□□□□ -1.75
SF1-209ENST00000433274 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.76
SF1-209ENST00000433274 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
SF1-209ENST00000433274 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
SF1-209ENST00000433274 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
SF1-209ENST00000433274 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
SF1-209ENST00000433274 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
SF1-209ENST00000433274 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
SF1-209ENST00000433274 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
SF1-209ENST00000433274 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
SF1-209ENST00000433274 PRM1P04553 51 aa3.59□□□□□ -1.84
SF1-209ENST00000433274 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SF1-209ENST00000433274 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
SF1-209ENST00000433274 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
SF1-209ENST00000433274 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
SF1-209ENST00000433274 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
SF1-209ENST00000433274 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SF1-209ENST00000433274 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
SF1-209ENST00000433274 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
SF1-209ENST00000433274 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
SF1-209ENST00000433274 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
SF1-209ENST00000433274 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
SF1-209ENST00000433274 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SF1-209ENST00000433274 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
SF1-209ENST00000433274 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
SF1-209ENST00000433274 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
SF1-209ENST00000433274 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SF1-209ENST00000433274 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
SF1-209ENST00000433274 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
SF1-209ENST00000433274 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
SF1-209ENST00000433274 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
SF1-209ENST00000433274 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
SF1-209ENST00000433274 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
SF1-209ENST00000433274 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
SF1-209ENST00000433274 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms