RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 KRTAP4-8A0A0G2JLE6 195 aa2.9□□□□□ -1.95
CNKSR3-202ENST00000433165 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
CNKSR3-202ENST00000433165 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
CNKSR3-202ENST00000433165 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
CNKSR3-202ENST00000433165 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
CNKSR3-202ENST00000433165 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
CNKSR3-202ENST00000433165 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
CNKSR3-202ENST00000433165 NEBP20929 6669 aa2.83□□□□□ -1.96
CNKSR3-202ENST00000433165 KRTAP4-7Q9BYR0 210 aa2.82□□□□□ -1.96
CNKSR3-202ENST00000433165 SPRR2EP22531 72 aa2.81□□□□□ -1.96
CNKSR3-202ENST00000433165 SPRR2BP35325 72 aa2.81□□□□□ -1.96
CNKSR3-202ENST00000433165 SPRR2AP35326 72 aa2.81□□□□□ -1.96
CNKSR3-202ENST00000433165 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
CNKSR3-202ENST00000433165 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
CNKSR3-202ENST00000433165 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
CNKSR3-202ENST00000433165 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
CNKSR3-202ENST00000433165 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
CNKSR3-202ENST00000433165 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
CNKSR3-202ENST00000433165 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
CNKSR3-202ENST00000433165 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
CNKSR3-202ENST00000433165 SPRR2DP22532 72 aa2.73□□□□□ -1.97
CNKSR3-202ENST00000433165 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
CNKSR3-202ENST00000433165 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
CNKSR3-202ENST00000433165 KRTAP2-2Q9BYT5 123 aa2.7□□□□□ -1.98
CNKSR3-202ENST00000433165 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
CNKSR3-202ENST00000433165 KMT2DO14686 5537 aa2.7□□□□□ -1.98
CNKSR3-202ENST00000433165 KRTAP19-4Q3LI73 84 aa2.69□□□□□ -1.98
CNKSR3-202ENST00000433165 KRTAP4-9Q9BYQ8 210 aa2.69□□□□□ -1.98
CNKSR3-202ENST00000433165 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
CNKSR3-202ENST00000433165 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
CNKSR3-202ENST00000433165 MT1EP04732 61 aa2.6□□□□□ -1.99
CNKSR3-202ENST00000433165 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
CNKSR3-202ENST00000433165 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
CNKSR3-202ENST00000433165 LCE5AQ5TCM9 118 aa2.58□□□□□ -2
CNKSR3-202ENST00000433165 MT1GP13640 62 aa2.57□□□□□ -2
CNKSR3-202ENST00000433165 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
CNKSR3-202ENST00000433165 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
CNKSR3-202ENST00000433165 MT1LQ93083 61 aa2.51□□□□□ -2.01
CNKSR3-202ENST00000433165 MT1MQ8N339 61 aa2.48□□□□□ -2.01
CNKSR3-202ENST00000433165 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
CNKSR3-202ENST00000433165 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
CNKSR3-202ENST00000433165 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
CNKSR3-202ENST00000433165 MT4P47944 62 aa2.33□□□□□ -2.04
CNKSR3-202ENST00000433165 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
CNKSR3-202ENST00000433165 MT1AP04731 61 aa2.28□□□□□ -2.04
CNKSR3-202ENST00000433165 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
CNKSR3-202ENST00000433165 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
CNKSR3-202ENST00000433165 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
CNKSR3-202ENST00000433165 PRM1P04553 51 aa2.23□□□□□ -2.05
CNKSR3-202ENST00000433165 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
CNKSR3-202ENST00000433165 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
CNKSR3-202ENST00000433165 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
CNKSR3-202ENST00000433165 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
CNKSR3-202ENST00000433165 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
CNKSR3-202ENST00000433165 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
CNKSR3-202ENST00000433165 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
CNKSR3-202ENST00000433165 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
CNKSR3-202ENST00000433165 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
CNKSR3-202ENST00000433165 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
CNKSR3-202ENST00000433165 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
CNKSR3-202ENST00000433165 MT3P25713 68 aa2□□□□□ -2.09
CNKSR3-202ENST00000433165 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
CNKSR3-202ENST00000433165 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
CNKSR3-202ENST00000433165 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
CNKSR3-202ENST00000433165 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
CNKSR3-202ENST00000433165 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
CNKSR3-202ENST00000433165 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
CNKSR3-202ENST00000433165 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
CNKSR3-202ENST00000433165 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
CNKSR3-202ENST00000433165 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
CNKSR3-202ENST00000433165 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
CNKSR3-202ENST00000433165 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
CNKSR3-202ENST00000433165 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
CNKSR3-202ENST00000433165 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
CNKSR3-202ENST00000433165 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
CNKSR3-202ENST00000433165 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
CNKSR3-202ENST00000433165 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
CNKSR3-202ENST00000433165 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 404.6 ms