RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 CHKB-CPT1BH3BT56 60 aa5.07□□□□□ -1.6
NUP50-209ENST00000432340 SPANXA2-OT1Q8N9U9 137 aa5.05□□□□□ -1.6
NUP50-209ENST00000432340 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
NUP50-209ENST00000432340 SNURFQ9Y675 71 aa5.04□□□□□ -1.6
NUP50-209ENST00000432340 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
NUP50-209ENST00000432340 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
NUP50-209ENST00000432340 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
NUP50-209ENST00000432340 SERP2Q8N6R1 65 aa4.98□□□□□ -1.61
NUP50-209ENST00000432340 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
NUP50-209ENST00000432340 TNP1P09430 55 aa4.89□□□□□ -1.63
NUP50-209ENST00000432340 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
NUP50-209ENST00000432340 COA5Q86WW8 74 aa4.87□□□□□ -1.63
NUP50-209ENST00000432340 SEC61GP60059 68 aa4.81□□□□□ -1.64
NUP50-209ENST00000432340 SERP1Q9Y6X1 66 aa4.8□□□□□ -1.64
NUP50-209ENST00000432340 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
NUP50-209ENST00000432340 COX7CP15954 63 aa4.79□□□□□ -1.64
NUP50-209ENST00000432340 H7BZZ5 65 aa4.76□□□□□ -1.65
NUP50-209ENST00000432340 A0A1B0GU33 70 aa4.75□□□□□ -1.65
NUP50-209ENST00000432340 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
NUP50-209ENST00000432340 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
NUP50-209ENST00000432340 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
NUP50-209ENST00000432340 MT1AP04731 61 aa4.68□□□□□ -1.66
NUP50-209ENST00000432340 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
NUP50-209ENST00000432340 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
NUP50-209ENST00000432340 SMIM26A0A096LP01 95 aa4.61□□□□□ -1.67
NUP50-209ENST00000432340 A0A1B0GU69 56 aa4.61□□□□□ -1.67
NUP50-209ENST00000432340 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
NUP50-209ENST00000432340 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
NUP50-209ENST00000432340 A8MU10 97 aa4.55□□□□□ -1.68
NUP50-209ENST00000432340 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
NUP50-209ENST00000432340 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
NUP50-209ENST00000432340 ATP5EP56381 51 aaPredicted RBP4.47□□□□□ -1.69
NUP50-209ENST00000432340 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
NUP50-209ENST00000432340 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
NUP50-209ENST00000432340 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
NUP50-209ENST00000432340 MT3P25713 68 aa4.38□□□□□ -1.71
NUP50-209ENST00000432340 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
NUP50-209ENST00000432340 UQCR11O14957 56 aa4.33□□□□□ -1.72
NUP50-209ENST00000432340 TMEM258P61165 79 aa4.32□□□□□ -1.72
NUP50-209ENST00000432340 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
NUP50-209ENST00000432340 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
NUP50-209ENST00000432340 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
NUP50-209ENST00000432340 K7ERS5 55 aa4.14□□□□□ -1.75
NUP50-209ENST00000432340 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
NUP50-209ENST00000432340 V9GYY9 64 aa4.12□□□□□ -1.75
NUP50-209ENST00000432340 H3BS24 57 aa4.11□□□□□ -1.75
NUP50-209ENST00000432340 Q1T7F1 81 aa4.1□□□□□ -1.75
NUP50-209ENST00000432340 PSPHP1O15172 72 aa4.07□□□□□ -1.76
NUP50-209ENST00000432340 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
NUP50-209ENST00000432340 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
NUP50-209ENST00000432340 A6NED7 52 aa3.93□□□□□ -1.78
NUP50-209ENST00000432340 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
NUP50-209ENST00000432340 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
NUP50-209ENST00000432340 ROMO1P60602 79 aa3.86□□□□□ -1.79
NUP50-209ENST00000432340 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.79
NUP50-209ENST00000432340 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
NUP50-209ENST00000432340 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
NUP50-209ENST00000432340 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
NUP50-209ENST00000432340 PCP4P48539 62 aa3.62□□□□□ -1.83
NUP50-209ENST00000432340 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
NUP50-209ENST00000432340 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
NUP50-209ENST00000432340 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
NUP50-209ENST00000432340 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
NUP50-209ENST00000432340 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
NUP50-209ENST00000432340 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
NUP50-209ENST00000432340 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
NUP50-209ENST00000432340 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
NUP50-209ENST00000432340 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
NUP50-209ENST00000432340 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
NUP50-209ENST00000432340 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
NUP50-209ENST00000432340 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
NUP50-209ENST00000432340 LUZP6Q538Z0 58 aa2.55□□□□□ -2
NUP50-209ENST00000432340 SVIPQ8NHG7 77 aa2.52□□□□□ -2.01
NUP50-209ENST00000432340 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
NUP50-209ENST00000432340 A0A0A0MQY5 61 aa2.11□□□□□ -2.07
NUP50-209ENST00000432340 PRM1P04553 51 aa1.95□□□□□ -2.1
NUP50-209ENST00000432340 NDUFAF8A1L188 74 aa1.9□□□□□ -2.11
NUP50-209ENST00000432340 INE1O15225 51 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 57.1 ms