RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.63
SEC13-212ENST00000432213 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
SEC13-212ENST00000432213 A0A1B0GU33 70 aa4.83□□□□□ -1.64
SEC13-212ENST00000432213 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
SEC13-212ENST00000432213 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
SEC13-212ENST00000432213 A8MU10 97 aa4.8□□□□□ -1.64
SEC13-212ENST00000432213 SERP1Q9Y6X1 66 aa4.8□□□□□ -1.64
SEC13-212ENST00000432213 SERP2Q8N6R1 65 aa4.79□□□□□ -1.64
SEC13-212ENST00000432213 SEC61GP60059 68 aa4.76□□□□□ -1.65
SEC13-212ENST00000432213 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
SEC13-212ENST00000432213 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
SEC13-212ENST00000432213 TNP1P09430 55 aa4.68□□□□□ -1.66
SEC13-212ENST00000432213 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
SEC13-212ENST00000432213 PCP4P48539 62 aa4.64□□□□□ -1.67
SEC13-212ENST00000432213 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
SEC13-212ENST00000432213 H7BZZ5 65 aa4.63□□□□□ -1.67
SEC13-212ENST00000432213 SMIM26A0A096LP01 95 aa4.62□□□□□ -1.67
SEC13-212ENST00000432213 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
SEC13-212ENST00000432213 A0A1B0GU69 56 aa4.59□□□□□ -1.67
SEC13-212ENST00000432213 COX7CP15954 63 aa4.56□□□□□ -1.68
SEC13-212ENST00000432213 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
SEC13-212ENST00000432213 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
SEC13-212ENST00000432213 ANAPC13Q9BS18 74 aa4.48□□□□□ -1.69
SEC13-212ENST00000432213 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
SEC13-212ENST00000432213 CCDC179H3BU77 68 aa4.47□□□□□ -1.69
SEC13-212ENST00000432213 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
SEC13-212ENST00000432213 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
SEC13-212ENST00000432213 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
SEC13-212ENST00000432213 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
SEC13-212ENST00000432213 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
SEC13-212ENST00000432213 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
SEC13-212ENST00000432213 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
SEC13-212ENST00000432213 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
SEC13-212ENST00000432213 MT1AP04731 61 aa4.26□□□□□ -1.73
SEC13-212ENST00000432213 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
SEC13-212ENST00000432213 TMEM258P61165 79 aa4.24□□□□□ -1.73
SEC13-212ENST00000432213 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
SEC13-212ENST00000432213 UQCR11O14957 56 aa4.18□□□□□ -1.74
SEC13-212ENST00000432213 ATP5EP56381 51 aaPredicted RBP4.18□□□□□ -1.74
SEC13-212ENST00000432213 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
SEC13-212ENST00000432213 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SEC13-212ENST00000432213 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
SEC13-212ENST00000432213 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
SEC13-212ENST00000432213 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
SEC13-212ENST00000432213 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
SEC13-212ENST00000432213 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
SEC13-212ENST00000432213 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
SEC13-212ENST00000432213 Q1T7F1 81 aa3.96□□□□□ -1.78
SEC13-212ENST00000432213 K7ERS5 55 aa3.94□□□□□ -1.78
SEC13-212ENST00000432213 PSPHP1O15172 72 aa3.93□□□□□ -1.78
SEC13-212ENST00000432213 V9GYY9 64 aa3.87□□□□□ -1.79
SEC13-212ENST00000432213 MT3P25713 68 aa3.84□□□□□ -1.79
SEC13-212ENST00000432213 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
SEC13-212ENST00000432213 ROMO1P60602 79 aa3.74□□□□□ -1.81
SEC13-212ENST00000432213 A6NED7 52 aa3.71□□□□□ -1.82
SEC13-212ENST00000432213 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
SEC13-212ENST00000432213 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
SEC13-212ENST00000432213 BRK1Q8WUW1 75 aa3.59□□□□□ -1.83
SEC13-212ENST00000432213 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SEC13-212ENST00000432213 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
SEC13-212ENST00000432213 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
SEC13-212ENST00000432213 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
SEC13-212ENST00000432213 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
SEC13-212ENST00000432213 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SEC13-212ENST00000432213 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
SEC13-212ENST00000432213 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
SEC13-212ENST00000432213 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
SEC13-212ENST00000432213 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
SEC13-212ENST00000432213 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
SEC13-212ENST00000432213 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
SEC13-212ENST00000432213 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SEC13-212ENST00000432213 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
SEC13-212ENST00000432213 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2.01
SEC13-212ENST00000432213 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
SEC13-212ENST00000432213 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
SEC13-212ENST00000432213 INE1O15225 51 aa2□□□□□ -2.09
SEC13-212ENST00000432213 PRM1P04553 51 aa1.96□□□□□ -2.1
SEC13-212ENST00000432213 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 215.5 ms