RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
VRK2-205ENST00000432057 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.33
VRK2-205ENST00000432057 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
VRK2-205ENST00000432057 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
VRK2-205ENST00000432057 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
VRK2-205ENST00000432057 KRTAP19-3Q7Z4W3 81 aa6.66□□□□□ -1.34
VRK2-205ENST00000432057 SYNE2Q8WXH0 6885 aaKnown RBP6.65□□□□□ -1.34
VRK2-205ENST00000432057 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
VRK2-205ENST00000432057 MT1GP13640 62 aa6.59□□□□□ -1.35
VRK2-205ENST00000432057 MT1MQ8N339 61 aa6.59□□□□□ -1.35
VRK2-205ENST00000432057 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
VRK2-205ENST00000432057 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
VRK2-205ENST00000432057 LCE5AQ5TCM9 118 aa6.5□□□□□ -1.37
VRK2-205ENST00000432057 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
VRK2-205ENST00000432057 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.39
VRK2-205ENST00000432057 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
VRK2-205ENST00000432057 SPRR2EP22531 72 aa6.32□□□□□ -1.4
VRK2-205ENST00000432057 SPRR2BP35325 72 aa6.32□□□□□ -1.4
VRK2-205ENST00000432057 SPRR2AP35326 72 aa6.32□□□□□ -1.4
VRK2-205ENST00000432057 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
VRK2-205ENST00000432057 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
VRK2-205ENST00000432057 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
VRK2-205ENST00000432057 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
VRK2-205ENST00000432057 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
VRK2-205ENST00000432057 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
VRK2-205ENST00000432057 SPRR2DP22532 72 aa6.09□□□□□ -1.43
VRK2-205ENST00000432057 NEBP20929 6669 aa6.05□□□□□ -1.44
VRK2-205ENST00000432057 INE1O15225 51 aa5.94□□□□□ -1.46
VRK2-205ENST00000432057 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
VRK2-205ENST00000432057 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
VRK2-205ENST00000432057 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
VRK2-205ENST00000432057 MT1AP04731 61 aa5.85□□□□□ -1.47
VRK2-205ENST00000432057 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
VRK2-205ENST00000432057 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
VRK2-205ENST00000432057 KRTAP20-1Q3LI63 56 aa5.6□□□□□ -1.51
VRK2-205ENST00000432057 KRTAP2-2Q9BYT5 123 aa5.58□□□□□ -1.52
VRK2-205ENST00000432057 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
VRK2-205ENST00000432057 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
VRK2-205ENST00000432057 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
VRK2-205ENST00000432057 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
VRK2-205ENST00000432057 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
VRK2-205ENST00000432057 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
VRK2-205ENST00000432057 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
VRK2-205ENST00000432057 MT4P47944 62 aa5.28□□□□□ -1.56
VRK2-205ENST00000432057 MT3P25713 68 aa5.26□□□□□ -1.57
VRK2-205ENST00000432057 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
VRK2-205ENST00000432057 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
VRK2-205ENST00000432057 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.58
VRK2-205ENST00000432057 HMCN1Q96RW7 5635 aa5.12□□□□□ -1.59
VRK2-205ENST00000432057 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
VRK2-205ENST00000432057 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
VRK2-205ENST00000432057 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
VRK2-205ENST00000432057 KRTAP9-9Q9BYP9 154 aa4.82□□□□□ -1.64
VRK2-205ENST00000432057 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
VRK2-205ENST00000432057 PRM1P04553 51 aa4.71□□□□□ -1.66
VRK2-205ENST00000432057 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
VRK2-205ENST00000432057 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
VRK2-205ENST00000432057 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
VRK2-205ENST00000432057 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
VRK2-205ENST00000432057 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
VRK2-205ENST00000432057 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
VRK2-205ENST00000432057 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
VRK2-205ENST00000432057 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
VRK2-205ENST00000432057 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
VRK2-205ENST00000432057 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
VRK2-205ENST00000432057 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
VRK2-205ENST00000432057 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
VRK2-205ENST00000432057 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
VRK2-205ENST00000432057 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
VRK2-205ENST00000432057 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
VRK2-205ENST00000432057 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
VRK2-205ENST00000432057 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
VRK2-205ENST00000432057 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
VRK2-205ENST00000432057 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
VRK2-205ENST00000432057 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
VRK2-205ENST00000432057 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
VRK2-205ENST00000432057 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
VRK2-205ENST00000432057 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms