RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 SEC61GP60059 68 aa5.08□□□□□ -1.6
SMARCE1-205ENST00000431889 HMCN1Q96RW7 5635 aa5.08□□□□□ -1.6
SMARCE1-205ENST00000431889 A0A1B0GU33 70 aa5.06□□□□□ -1.6
SMARCE1-205ENST00000431889 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
SMARCE1-205ENST00000431889 MT1LQ93083 61 aa5.05□□□□□ -1.6
SMARCE1-205ENST00000431889 A8MU10 97 aa4.99□□□□□ -1.61
SMARCE1-205ENST00000431889 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
SMARCE1-205ENST00000431889 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
SMARCE1-205ENST00000431889 AHNAK2Q8IVF2 5795 aa4.99□□□□□ -1.61
SMARCE1-205ENST00000431889 PCP4P48539 62 aa4.95□□□□□ -1.62
SMARCE1-205ENST00000431889 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
SMARCE1-205ENST00000431889 TMEM258P61165 79 aa4.95□□□□□ -1.62
SMARCE1-205ENST00000431889 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
SMARCE1-205ENST00000431889 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
SMARCE1-205ENST00000431889 A0A1B0GU69 56 aa4.87□□□□□ -1.63
SMARCE1-205ENST00000431889 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
SMARCE1-205ENST00000431889 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
SMARCE1-205ENST00000431889 TNP1P09430 55 aa4.86□□□□□ -1.63
SMARCE1-205ENST00000431889 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
SMARCE1-205ENST00000431889 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
SMARCE1-205ENST00000431889 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
SMARCE1-205ENST00000431889 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
SMARCE1-205ENST00000431889 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
SMARCE1-205ENST00000431889 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
SMARCE1-205ENST00000431889 RPS28P62857 69 aaKnown RBP4.65□□□□□ -1.67
SMARCE1-205ENST00000431889 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-205ENST00000431889 PRR15LQ9BU68 103 aa4.62□□□□□ -1.67
SMARCE1-205ENST00000431889 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-205ENST00000431889 Q1T7F1 81 aa4.59□□□□□ -1.67
SMARCE1-205ENST00000431889 V9GYY9 64 aa4.59□□□□□ -1.67
SMARCE1-205ENST00000431889 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
SMARCE1-205ENST00000431889 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
SMARCE1-205ENST00000431889 PSPHP1O15172 72 aa4.53□□□□□ -1.69
SMARCE1-205ENST00000431889 UQCR11O14957 56 aa4.48□□□□□ -1.69
SMARCE1-205ENST00000431889 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
SMARCE1-205ENST00000431889 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
SMARCE1-205ENST00000431889 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
SMARCE1-205ENST00000431889 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
SMARCE1-205ENST00000431889 A6NED7 52 aa4.39□□□□□ -1.71
SMARCE1-205ENST00000431889 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
SMARCE1-205ENST00000431889 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
SMARCE1-205ENST00000431889 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
SMARCE1-205ENST00000431889 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
SMARCE1-205ENST00000431889 K7ERS5 55 aa4.27□□□□□ -1.73
SMARCE1-205ENST00000431889 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
SMARCE1-205ENST00000431889 MT1AP04731 61 aa4.26□□□□□ -1.73
SMARCE1-205ENST00000431889 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
SMARCE1-205ENST00000431889 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
SMARCE1-205ENST00000431889 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
SMARCE1-205ENST00000431889 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
SMARCE1-205ENST00000431889 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
SMARCE1-205ENST00000431889 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
SMARCE1-205ENST00000431889 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
SMARCE1-205ENST00000431889 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-205ENST00000431889 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
SMARCE1-205ENST00000431889 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
SMARCE1-205ENST00000431889 ROMO1P60602 79 aa4.04□□□□□ -1.76
SMARCE1-205ENST00000431889 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
SMARCE1-205ENST00000431889 PRO0628Q9UI54 55 aa3.93□□□□□ -1.78
SMARCE1-205ENST00000431889 PMAIP1Q13794 54 aa3.9□□□□□ -1.78
SMARCE1-205ENST00000431889 MT3P25713 68 aa3.89□□□□□ -1.79
SMARCE1-205ENST00000431889 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
SMARCE1-205ENST00000431889 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
SMARCE1-205ENST00000431889 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
SMARCE1-205ENST00000431889 LCE1CQ5T751 118 aa3.34□□□□□ -1.88
SMARCE1-205ENST00000431889 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
SMARCE1-205ENST00000431889 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SMARCE1-205ENST00000431889 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
SMARCE1-205ENST00000431889 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
SMARCE1-205ENST00000431889 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
SMARCE1-205ENST00000431889 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
SMARCE1-205ENST00000431889 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
SMARCE1-205ENST00000431889 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
SMARCE1-205ENST00000431889 INE1O15225 51 aa2.3□□□□□ -2.04
SMARCE1-205ENST00000431889 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
SMARCE1-205ENST00000431889 PRM1P04553 51 aa2.1□□□□□ -2.07
SMARCE1-205ENST00000431889 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 58.8 ms