RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 A8MU10 97 aa4.81□□□□□ -1.64
SEC13-211ENST00000431352 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
SEC13-211ENST00000431352 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
SEC13-211ENST00000431352 TNP1P09430 55 aa4.77□□□□□ -1.65
SEC13-211ENST00000431352 A0A1B0GU69 56 aa4.76□□□□□ -1.65
SEC13-211ENST00000431352 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
SEC13-211ENST00000431352 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
SEC13-211ENST00000431352 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
SEC13-211ENST00000431352 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
SEC13-211ENST00000431352 KRTAP5-7Q6L8G8 165 aa4.62□□□□□ -1.67
SEC13-211ENST00000431352 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
SEC13-211ENST00000431352 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
SEC13-211ENST00000431352 TMEM258P61165 79 aa4.56□□□□□ -1.68
SEC13-211ENST00000431352 PRR15LQ9BU68 103 aa4.56□□□□□ -1.68
SEC13-211ENST00000431352 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
SEC13-211ENST00000431352 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
SEC13-211ENST00000431352 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
SEC13-211ENST00000431352 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
SEC13-211ENST00000431352 UQCR11O14957 56 aa4.44□□□□□ -1.7
SEC13-211ENST00000431352 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
SEC13-211ENST00000431352 MIR22HGQ0VDD5 57 aa4.37□□□□□ -1.71
SEC13-211ENST00000431352 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
SEC13-211ENST00000431352 PSPHP1O15172 72 aa4.35□□□□□ -1.71
SEC13-211ENST00000431352 Q1T7F1 81 aa4.3□□□□□ -1.72
SEC13-211ENST00000431352 V9GYY9 64 aa4.27□□□□□ -1.73
SEC13-211ENST00000431352 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
SEC13-211ENST00000431352 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
SEC13-211ENST00000431352 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
SEC13-211ENST00000431352 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
SEC13-211ENST00000431352 K7ERS5 55 aa4.23□□□□□ -1.73
SEC13-211ENST00000431352 PCP4P48539 62 aa4.21□□□□□ -1.74
SEC13-211ENST00000431352 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
SEC13-211ENST00000431352 MT1AP04731 61 aa4.18□□□□□ -1.74
SEC13-211ENST00000431352 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
SEC13-211ENST00000431352 A6NED7 52 aa4.17□□□□□ -1.74
SEC13-211ENST00000431352 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
SEC13-211ENST00000431352 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
SEC13-211ENST00000431352 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
SEC13-211ENST00000431352 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
SEC13-211ENST00000431352 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
SEC13-211ENST00000431352 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
SEC13-211ENST00000431352 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
SEC13-211ENST00000431352 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
SEC13-211ENST00000431352 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
SEC13-211ENST00000431352 ROMO1P60602 79 aa3.99□□□□□ -1.77
SEC13-211ENST00000431352 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
SEC13-211ENST00000431352 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
SEC13-211ENST00000431352 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
SEC13-211ENST00000431352 MT3P25713 68 aa3.83□□□□□ -1.8
SEC13-211ENST00000431352 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
SEC13-211ENST00000431352 H3BS24 57 aa3.73□□□□□ -1.81
SEC13-211ENST00000431352 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
SEC13-211ENST00000431352 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
SEC13-211ENST00000431352 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
SEC13-211ENST00000431352 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
SEC13-211ENST00000431352 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
SEC13-211ENST00000431352 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
SEC13-211ENST00000431352 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
SEC13-211ENST00000431352 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SEC13-211ENST00000431352 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
SEC13-211ENST00000431352 SVIPQ8NHG7 77 aa3.18□□□□□ -1.9
SEC13-211ENST00000431352 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
SEC13-211ENST00000431352 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
SEC13-211ENST00000431352 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
SEC13-211ENST00000431352 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
SEC13-211ENST00000431352 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
SEC13-211ENST00000431352 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
SEC13-211ENST00000431352 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
SEC13-211ENST00000431352 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
SEC13-211ENST00000431352 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SEC13-211ENST00000431352 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
SEC13-211ENST00000431352 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
SEC13-211ENST00000431352 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SEC13-211ENST00000431352 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
SEC13-211ENST00000431352 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
SEC13-211ENST00000431352 PRM1P04553 51 aa2.08□□□□□ -2.08
SEC13-211ENST00000431352 INE1O15225 51 aa2.01□□□□□ -2.09
SEC13-211ENST00000431352 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms