RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
HOXC4-202ENST00000430889 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
HOXC4-202ENST00000430889 USH2AO75445 5202 aa5.41□□□□□ -1.54
HOXC4-202ENST00000430889 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
HOXC4-202ENST00000430889 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
HOXC4-202ENST00000430889 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
HOXC4-202ENST00000430889 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
HOXC4-202ENST00000430889 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.57
HOXC4-202ENST00000430889 KMT2DO14686 5537 aa5.15□□□□□ -1.59
HOXC4-202ENST00000430889 KRTAP19-6Q3LI70 58 aa5.14□□□□□ -1.59
HOXC4-202ENST00000430889 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
HOXC4-202ENST00000430889 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
HOXC4-202ENST00000430889 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
HOXC4-202ENST00000430889 MT1EP04732 61 aa4.96□□□□□ -1.61
HOXC4-202ENST00000430889 MT1LQ93083 61 aa4.92□□□□□ -1.62
HOXC4-202ENST00000430889 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
HOXC4-202ENST00000430889 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
HOXC4-202ENST00000430889 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
HOXC4-202ENST00000430889 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
HOXC4-202ENST00000430889 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
HOXC4-202ENST00000430889 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
HOXC4-202ENST00000430889 MT1MQ8N339 61 aa4.65□□□□□ -1.66
HOXC4-202ENST00000430889 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
HOXC4-202ENST00000430889 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
HOXC4-202ENST00000430889 MT1GP13640 62 aa4.64□□□□□ -1.67
HOXC4-202ENST00000430889 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
HOXC4-202ENST00000430889 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
HOXC4-202ENST00000430889 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
HOXC4-202ENST00000430889 INE1O15225 51 aa4.57□□□□□ -1.68
HOXC4-202ENST00000430889 SPRR2FQ96RM1 72 aa4.54□□□□□ -1.68
HOXC4-202ENST00000430889 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
HOXC4-202ENST00000430889 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
HOXC4-202ENST00000430889 NEBP20929 6669 aa4.44□□□□□ -1.7
HOXC4-202ENST00000430889 MDN1Q9NU22 5596 aa4.4□□□□□ -1.7
HOXC4-202ENST00000430889 SPRR2EP22531 72 aa4.38□□□□□ -1.71
HOXC4-202ENST00000430889 SPRR2BP35325 72 aa4.38□□□□□ -1.71
HOXC4-202ENST00000430889 SPRR2AP35326 72 aa4.38□□□□□ -1.71
HOXC4-202ENST00000430889 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
HOXC4-202ENST00000430889 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
HOXC4-202ENST00000430889 SPRR2DP22532 72 aa4.23□□□□□ -1.73
HOXC4-202ENST00000430889 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.73
HOXC4-202ENST00000430889 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
HOXC4-202ENST00000430889 MT1AP04731 61 aa4.16□□□□□ -1.74
HOXC4-202ENST00000430889 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
HOXC4-202ENST00000430889 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
HOXC4-202ENST00000430889 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
HOXC4-202ENST00000430889 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
HOXC4-202ENST00000430889 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
HOXC4-202ENST00000430889 LCE1EQ5T753 118 aa4□□□□□ -1.77
HOXC4-202ENST00000430889 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
HOXC4-202ENST00000430889 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
HOXC4-202ENST00000430889 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
HOXC4-202ENST00000430889 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
HOXC4-202ENST00000430889 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
HOXC4-202ENST00000430889 MT3P25713 68 aa3.71□□□□□ -1.81
HOXC4-202ENST00000430889 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
HOXC4-202ENST00000430889 MT4P47944 62 aa3.68□□□□□ -1.82
HOXC4-202ENST00000430889 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
HOXC4-202ENST00000430889 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
HOXC4-202ENST00000430889 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
HOXC4-202ENST00000430889 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
HOXC4-202ENST00000430889 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
HOXC4-202ENST00000430889 PRM1P04553 51 aa3.46□□□□□ -1.85
HOXC4-202ENST00000430889 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
HOXC4-202ENST00000430889 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
HOXC4-202ENST00000430889 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
HOXC4-202ENST00000430889 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
HOXC4-202ENST00000430889 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
HOXC4-202ENST00000430889 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
HOXC4-202ENST00000430889 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
HOXC4-202ENST00000430889 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
HOXC4-202ENST00000430889 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
HOXC4-202ENST00000430889 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
HOXC4-202ENST00000430889 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
HOXC4-202ENST00000430889 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
HOXC4-202ENST00000430889 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
HOXC4-202ENST00000430889 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 48.5 ms