RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
SMPD4-204ENST00000430682 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
SMPD4-204ENST00000430682 MT1MQ8N339 61 aa4.46□□□□□ -1.7
SMPD4-204ENST00000430682 MT1LQ93083 61 aa4.46□□□□□ -1.7
SMPD4-204ENST00000430682 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
SMPD4-204ENST00000430682 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
SMPD4-204ENST00000430682 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.71
SMPD4-204ENST00000430682 Q1T7F1 81 aa4.39□□□□□ -1.71
SMPD4-204ENST00000430682 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
SMPD4-204ENST00000430682 TNP1P09430 55 aa4.38□□□□□ -1.71
SMPD4-204ENST00000430682 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
SMPD4-204ENST00000430682 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
SMPD4-204ENST00000430682 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
SMPD4-204ENST00000430682 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
SMPD4-204ENST00000430682 V9GYY9 64 aa4.34□□□□□ -1.71
SMPD4-204ENST00000430682 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
SMPD4-204ENST00000430682 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
SMPD4-204ENST00000430682 MT4P47944 62 aa4.3□□□□□ -1.72
SMPD4-204ENST00000430682 PSPHP1O15172 72 aa4.27□□□□□ -1.73
SMPD4-204ENST00000430682 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
SMPD4-204ENST00000430682 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
SMPD4-204ENST00000430682 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
SMPD4-204ENST00000430682 UQCR11O14957 56 aa4.24□□□□□ -1.73
SMPD4-204ENST00000430682 MIR22HGQ0VDD5 57 aa4.16□□□□□ -1.74
SMPD4-204ENST00000430682 A6NED7 52 aa4.12□□□□□ -1.75
SMPD4-204ENST00000430682 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
SMPD4-204ENST00000430682 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
SMPD4-204ENST00000430682 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
SMPD4-204ENST00000430682 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
SMPD4-204ENST00000430682 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
SMPD4-204ENST00000430682 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
SMPD4-204ENST00000430682 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
SMPD4-204ENST00000430682 BRK1Q8WUW1 75 aa4□□□□□ -1.77
SMPD4-204ENST00000430682 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
SMPD4-204ENST00000430682 K7ERS5 55 aa3.99□□□□□ -1.77
SMPD4-204ENST00000430682 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
SMPD4-204ENST00000430682 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
SMPD4-204ENST00000430682 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
SMPD4-204ENST00000430682 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
SMPD4-204ENST00000430682 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
SMPD4-204ENST00000430682 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
SMPD4-204ENST00000430682 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
SMPD4-204ENST00000430682 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
SMPD4-204ENST00000430682 ROMO1P60602 79 aa3.81□□□□□ -1.8
SMPD4-204ENST00000430682 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
SMPD4-204ENST00000430682 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
SMPD4-204ENST00000430682 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
SMPD4-204ENST00000430682 MT1AP04731 61 aa3.78□□□□□ -1.8
SMPD4-204ENST00000430682 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
SMPD4-204ENST00000430682 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
SMPD4-204ENST00000430682 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
SMPD4-204ENST00000430682 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
SMPD4-204ENST00000430682 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
SMPD4-204ENST00000430682 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
SMPD4-204ENST00000430682 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
SMPD4-204ENST00000430682 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
SMPD4-204ENST00000430682 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
SMPD4-204ENST00000430682 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
SMPD4-204ENST00000430682 MT3P25713 68 aa3.42□□□□□ -1.86
SMPD4-204ENST00000430682 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
SMPD4-204ENST00000430682 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
SMPD4-204ENST00000430682 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
SMPD4-204ENST00000430682 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
SMPD4-204ENST00000430682 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
SMPD4-204ENST00000430682 LUZP6Q538Z0 58 aa2.86□□□□□ -1.95
SMPD4-204ENST00000430682 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
SMPD4-204ENST00000430682 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SMPD4-204ENST00000430682 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
SMPD4-204ENST00000430682 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
SMPD4-204ENST00000430682 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
SMPD4-204ENST00000430682 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
SMPD4-204ENST00000430682 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
SMPD4-204ENST00000430682 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SMPD4-204ENST00000430682 INE1O15225 51 aa2.3□□□□□ -2.04
SMPD4-204ENST00000430682 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
SMPD4-204ENST00000430682 PRM1P04553 51 aa1.98□□□□□ -2.09
SMPD4-204ENST00000430682 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
SMPD4-204ENST00000430682 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 321.6 ms