RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 DSTQ03001 7570 aaKnown RBP6.25□□□□□ -1.41
CTSD-203ENST00000429746 MT1LQ93083 61 aa6.24□□□□□ -1.41
CTSD-203ENST00000429746 MT1GP13640 62 aa6.22□□□□□ -1.41
CTSD-203ENST00000429746 MT1MQ8N339 61 aa6.17□□□□□ -1.42
CTSD-203ENST00000429746 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
CTSD-203ENST00000429746 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
CTSD-203ENST00000429746 A6NED7 52 aa6.07□□□□□ -1.44
CTSD-203ENST00000429746 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
CTSD-203ENST00000429746 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
CTSD-203ENST00000429746 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
CTSD-203ENST00000429746 K7ERS5 55 aa6.03□□□□□ -1.44
CTSD-203ENST00000429746 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
CTSD-203ENST00000429746 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
CTSD-203ENST00000429746 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
CTSD-203ENST00000429746 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
CTSD-203ENST00000429746 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.46
CTSD-203ENST00000429746 GPR98Q8WXG9 6306 aa5.89□□□□□ -1.47
CTSD-203ENST00000429746 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
CTSD-203ENST00000429746 KRTAP5-4Q6L8H1 288 aa5.84□□□□□ -1.47
CTSD-203ENST00000429746 MT4P47944 62 aa5.82□□□□□ -1.48
CTSD-203ENST00000429746 ROMO1P60602 79 aa5.8□□□□□ -1.48
CTSD-203ENST00000429746 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
CTSD-203ENST00000429746 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
CTSD-203ENST00000429746 KRTAP5-5Q701N2 237 aaPredicted RBP5.71□□□□□ -1.5
CTSD-203ENST00000429746 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
CTSD-203ENST00000429746 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
CTSD-203ENST00000429746 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
CTSD-203ENST00000429746 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
CTSD-203ENST00000429746 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
CTSD-203ENST00000429746 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
CTSD-203ENST00000429746 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
CTSD-203ENST00000429746 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
CTSD-203ENST00000429746 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
CTSD-203ENST00000429746 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
CTSD-203ENST00000429746 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
CTSD-203ENST00000429746 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
CTSD-203ENST00000429746 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
CTSD-203ENST00000429746 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
CTSD-203ENST00000429746 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
CTSD-203ENST00000429746 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
CTSD-203ENST00000429746 MT1AP04731 61 aa5.29□□□□□ -1.56
CTSD-203ENST00000429746 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
CTSD-203ENST00000429746 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
CTSD-203ENST00000429746 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
CTSD-203ENST00000429746 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
CTSD-203ENST00000429746 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
CTSD-203ENST00000429746 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
CTSD-203ENST00000429746 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
CTSD-203ENST00000429746 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
CTSD-203ENST00000429746 MT3P25713 68 aa4.78□□□□□ -1.64
CTSD-203ENST00000429746 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
CTSD-203ENST00000429746 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
CTSD-203ENST00000429746 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
CTSD-203ENST00000429746 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
CTSD-203ENST00000429746 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
CTSD-203ENST00000429746 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
CTSD-203ENST00000429746 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
CTSD-203ENST00000429746 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
CTSD-203ENST00000429746 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
CTSD-203ENST00000429746 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
CTSD-203ENST00000429746 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
CTSD-203ENST00000429746 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
CTSD-203ENST00000429746 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
CTSD-203ENST00000429746 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
CTSD-203ENST00000429746 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
CTSD-203ENST00000429746 H3BS24 57 aa3.75□□□□□ -1.81
CTSD-203ENST00000429746 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
CTSD-203ENST00000429746 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
CTSD-203ENST00000429746 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
CTSD-203ENST00000429746 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
CTSD-203ENST00000429746 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
CTSD-203ENST00000429746 INE1O15225 51 aa3.29□□□□□ -1.88
CTSD-203ENST00000429746 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
CTSD-203ENST00000429746 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
CTSD-203ENST00000429746 PRM1P04553 51 aa2.99□□□□□ -1.93
CTSD-203ENST00000429746 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CTSD-203ENST00000429746 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
CTSD-203ENST00000429746 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms