RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 KMT2DO14686 5537 aa3.05□□□□□ -1.92
CDC42BPA-206ENST00000429440 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
CDC42BPA-206ENST00000429440 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
CDC42BPA-206ENST00000429440 KRTAP12-4P60329 112 aa3□□□□□ -1.93
CDC42BPA-206ENST00000429440 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
CDC42BPA-206ENST00000429440 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
CDC42BPA-206ENST00000429440 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
CDC42BPA-206ENST00000429440 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-206ENST00000429440 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
CDC42BPA-206ENST00000429440 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-206ENST00000429440 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-206ENST00000429440 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
CDC42BPA-206ENST00000429440 NEBP20929 6669 aa2.87□□□□□ -1.95
CDC42BPA-206ENST00000429440 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
CDC42BPA-206ENST00000429440 LCE3BQ5TA77 95 aa2.86□□□□□ -1.95
CDC42BPA-206ENST00000429440 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
CDC42BPA-206ENST00000429440 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
CDC42BPA-206ENST00000429440 KRTAP4-7Q9BYR0 210 aa2.82□□□□□ -1.96
CDC42BPA-206ENST00000429440 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
CDC42BPA-206ENST00000429440 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
CDC42BPA-206ENST00000429440 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
CDC42BPA-206ENST00000429440 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.96
CDC42BPA-206ENST00000429440 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
CDC42BPA-206ENST00000429440 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
CDC42BPA-206ENST00000429440 MT1EP04732 61 aa2.76□□□□□ -1.97
CDC42BPA-206ENST00000429440 MT1LQ93083 61 aa2.75□□□□□ -1.97
CDC42BPA-206ENST00000429440 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
CDC42BPA-206ENST00000429440 PRM1P04553 51 aa2.71□□□□□ -1.98
CDC42BPA-206ENST00000429440 LCE1DQ5T752 114 aa2.71□□□□□ -1.98
CDC42BPA-206ENST00000429440 MT1AP04731 61 aa2.66□□□□□ -1.98
CDC42BPA-206ENST00000429440 LCE5AQ5TCM9 118 aa2.66□□□□□ -1.98
CDC42BPA-206ENST00000429440 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-206ENST00000429440 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-206ENST00000429440 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
CDC42BPA-206ENST00000429440 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
CDC42BPA-206ENST00000429440 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
CDC42BPA-206ENST00000429440 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
CDC42BPA-206ENST00000429440 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
CDC42BPA-206ENST00000429440 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
CDC42BPA-206ENST00000429440 MT1MQ8N339 61 aa2.58□□□□□ -2
CDC42BPA-206ENST00000429440 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
CDC42BPA-206ENST00000429440 MT1GP13640 62 aa2.56□□□□□ -2
CDC42BPA-206ENST00000429440 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
CDC42BPA-206ENST00000429440 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
CDC42BPA-206ENST00000429440 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
CDC42BPA-206ENST00000429440 SPRR2FQ96RM1 72 aa2.49□□□□□ -2.01
CDC42BPA-206ENST00000429440 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
CDC42BPA-206ENST00000429440 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
CDC42BPA-206ENST00000429440 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
CDC42BPA-206ENST00000429440 SPRR2EP22531 72 aa2.37□□□□□ -2.03
CDC42BPA-206ENST00000429440 SPRR2BP35325 72 aa2.37□□□□□ -2.03
CDC42BPA-206ENST00000429440 SPRR2AP35326 72 aa2.37□□□□□ -2.03
CDC42BPA-206ENST00000429440 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.04
CDC42BPA-206ENST00000429440 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
CDC42BPA-206ENST00000429440 SPRR2DP22532 72 aa2.29□□□□□ -2.04
CDC42BPA-206ENST00000429440 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.05
CDC42BPA-206ENST00000429440 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
CDC42BPA-206ENST00000429440 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
CDC42BPA-206ENST00000429440 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
CDC42BPA-206ENST00000429440 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
CDC42BPA-206ENST00000429440 MT3P25713 68 aa2.14□□□□□ -2.07
CDC42BPA-206ENST00000429440 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
CDC42BPA-206ENST00000429440 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
CDC42BPA-206ENST00000429440 MT4P47944 62 aa2.07□□□□□ -2.08
CDC42BPA-206ENST00000429440 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
CDC42BPA-206ENST00000429440 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
CDC42BPA-206ENST00000429440 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
CDC42BPA-206ENST00000429440 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
CDC42BPA-206ENST00000429440 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
CDC42BPA-206ENST00000429440 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CDC42BPA-206ENST00000429440 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
CDC42BPA-206ENST00000429440 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
CDC42BPA-206ENST00000429440 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
CDC42BPA-206ENST00000429440 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
CDC42BPA-206ENST00000429440 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
CDC42BPA-206ENST00000429440 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CDC42BPA-206ENST00000429440 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
CDC42BPA-206ENST00000429440 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 108.6 ms