RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
SENP3-202ENST00000429205 MT1EP04732 61 aa4.73□□□□□ -1.65
SENP3-202ENST00000429205 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
SENP3-202ENST00000429205 MT1LQ93083 61 aa4.65□□□□□ -1.66
SENP3-202ENST00000429205 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
SENP3-202ENST00000429205 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
SENP3-202ENST00000429205 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
SENP3-202ENST00000429205 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
SENP3-202ENST00000429205 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
SENP3-202ENST00000429205 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
SENP3-202ENST00000429205 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
SENP3-202ENST00000429205 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
SENP3-202ENST00000429205 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
SENP3-202ENST00000429205 MT1GP13640 62 aa4.46□□□□□ -1.69
SENP3-202ENST00000429205 MT1MQ8N339 61 aa4.45□□□□□ -1.7
SENP3-202ENST00000429205 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
SENP3-202ENST00000429205 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
SENP3-202ENST00000429205 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
SENP3-202ENST00000429205 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
SENP3-202ENST00000429205 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
SENP3-202ENST00000429205 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
SENP3-202ENST00000429205 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
SENP3-202ENST00000429205 SPRR2EP22531 72 aa4.33□□□□□ -1.72
SENP3-202ENST00000429205 SPRR2BP35325 72 aa4.33□□□□□ -1.72
SENP3-202ENST00000429205 SPRR2AP35326 72 aa4.33□□□□□ -1.72
SENP3-202ENST00000429205 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
SENP3-202ENST00000429205 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
SENP3-202ENST00000429205 SPRR2DP22532 72 aa4.16□□□□□ -1.74
SENP3-202ENST00000429205 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
SENP3-202ENST00000429205 NEBP20929 6669 aa4.1□□□□□ -1.75
SENP3-202ENST00000429205 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
SENP3-202ENST00000429205 LCE1DQ5T752 114 aa4□□□□□ -1.77
SENP3-202ENST00000429205 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
SENP3-202ENST00000429205 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
SENP3-202ENST00000429205 PRM1P04553 51 aa3.95□□□□□ -1.78
SENP3-202ENST00000429205 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
SENP3-202ENST00000429205 MT1AP04731 61 aa3.93□□□□□ -1.78
SENP3-202ENST00000429205 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
SENP3-202ENST00000429205 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
SENP3-202ENST00000429205 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
SENP3-202ENST00000429205 MT3P25713 68 aa3.8□□□□□ -1.8
SENP3-202ENST00000429205 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SENP3-202ENST00000429205 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
SENP3-202ENST00000429205 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
SENP3-202ENST00000429205 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
SENP3-202ENST00000429205 MT4P47944 62 aa3.66□□□□□ -1.82
SENP3-202ENST00000429205 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
SENP3-202ENST00000429205 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
SENP3-202ENST00000429205 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
SENP3-202ENST00000429205 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
SENP3-202ENST00000429205 HMCN1Q96RW7 5635 aa3.54□□□□□ -1.84
SENP3-202ENST00000429205 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
SENP3-202ENST00000429205 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SENP3-202ENST00000429205 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
SENP3-202ENST00000429205 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
SENP3-202ENST00000429205 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
SENP3-202ENST00000429205 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
SENP3-202ENST00000429205 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
SENP3-202ENST00000429205 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
SENP3-202ENST00000429205 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
SENP3-202ENST00000429205 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
SENP3-202ENST00000429205 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
SENP3-202ENST00000429205 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SENP3-202ENST00000429205 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
SENP3-202ENST00000429205 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
SENP3-202ENST00000429205 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
SENP3-202ENST00000429205 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
SENP3-202ENST00000429205 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
SENP3-202ENST00000429205 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
SENP3-202ENST00000429205 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
SENP3-202ENST00000429205 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
SENP3-202ENST00000429205 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
SENP3-202ENST00000429205 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
SENP3-202ENST00000429205 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
SENP3-202ENST00000429205 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
SENP3-202ENST00000429205 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
SENP3-202ENST00000429205 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 128.7 ms