RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TNP1P09430 55 aa6.1□□□□□ -1.43
UPK3BP1-201ENST00000428678 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
UPK3BP1-201ENST00000428678 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
UPK3BP1-201ENST00000428678 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
UPK3BP1-201ENST00000428678 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
UPK3BP1-201ENST00000428678 ANAPC13Q9BS18 74 aa5.99□□□□□ -1.45
UPK3BP1-201ENST00000428678 A8MU10 97 aa5.98□□□□□ -1.45
UPK3BP1-201ENST00000428678 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
UPK3BP1-201ENST00000428678 COX7CP15954 63 aa5.95□□□□□ -1.46
UPK3BP1-201ENST00000428678 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
UPK3BP1-201ENST00000428678 A0A1B0GU69 56 aa5.86□□□□□ -1.47
UPK3BP1-201ENST00000428678 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
UPK3BP1-201ENST00000428678 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
UPK3BP1-201ENST00000428678 PCP4P48539 62 aa5.78□□□□□ -1.48
UPK3BP1-201ENST00000428678 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
UPK3BP1-201ENST00000428678 H7BZZ5 65 aa5.75□□□□□ -1.49
UPK3BP1-201ENST00000428678 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
UPK3BP1-201ENST00000428678 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.51
UPK3BP1-201ENST00000428678 MUC5ACP98088 5654 aa5.65□□□□□ -1.51
UPK3BP1-201ENST00000428678 TMEM258P61165 79 aa5.64□□□□□ -1.51
UPK3BP1-201ENST00000428678 ATP5EP56381 51 aaPredicted RBP5.61□□□□□ -1.51
UPK3BP1-201ENST00000428678 KRTAP5-2Q701N4 177 aa5.6□□□□□ -1.51
UPK3BP1-201ENST00000428678 KRTAP5-8O75690 187 aa5.56□□□□□ -1.52
UPK3BP1-201ENST00000428678 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
UPK3BP1-201ENST00000428678 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
UPK3BP1-201ENST00000428678 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
UPK3BP1-201ENST00000428678 KRTAP6-1Q3LI64 71 aa5.5□□□□□ -1.53
UPK3BP1-201ENST00000428678 MT1AP04731 61 aa5.49□□□□□ -1.53
UPK3BP1-201ENST00000428678 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
UPK3BP1-201ENST00000428678 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
UPK3BP1-201ENST00000428678 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
UPK3BP1-201ENST00000428678 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
UPK3BP1-201ENST00000428678 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
UPK3BP1-201ENST00000428678 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
UPK3BP1-201ENST00000428678 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
UPK3BP1-201ENST00000428678 UQCR11O14957 56 aa5.34□□□□□ -1.55
UPK3BP1-201ENST00000428678 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
UPK3BP1-201ENST00000428678 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
UPK3BP1-201ENST00000428678 Q1T7F1 81 aa5.23□□□□□ -1.57
UPK3BP1-201ENST00000428678 V9GYY9 64 aa5.23□□□□□ -1.57
UPK3BP1-201ENST00000428678 K7ERS5 55 aa5.19□□□□□ -1.58
UPK3BP1-201ENST00000428678 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
UPK3BP1-201ENST00000428678 PSPHP1O15172 72 aa5.17□□□□□ -1.58
UPK3BP1-201ENST00000428678 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
UPK3BP1-201ENST00000428678 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
UPK3BP1-201ENST00000428678 MT3P25713 68 aa5.05□□□□□ -1.6
UPK3BP1-201ENST00000428678 A6NED7 52 aa5.01□□□□□ -1.61
UPK3BP1-201ENST00000428678 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
UPK3BP1-201ENST00000428678 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
UPK3BP1-201ENST00000428678 ROMO1P60602 79 aa4.73□□□□□ -1.65
UPK3BP1-201ENST00000428678 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
UPK3BP1-201ENST00000428678 PRO0628Q9UI54 55 aa4.6□□□□□ -1.67
UPK3BP1-201ENST00000428678 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
UPK3BP1-201ENST00000428678 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
UPK3BP1-201ENST00000428678 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
UPK3BP1-201ENST00000428678 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
UPK3BP1-201ENST00000428678 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
UPK3BP1-201ENST00000428678 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
UPK3BP1-201ENST00000428678 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
UPK3BP1-201ENST00000428678 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
UPK3BP1-201ENST00000428678 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
UPK3BP1-201ENST00000428678 LCE1FQ5T754 118 aa4□□□□□ -1.77
UPK3BP1-201ENST00000428678 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
UPK3BP1-201ENST00000428678 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
UPK3BP1-201ENST00000428678 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
UPK3BP1-201ENST00000428678 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
UPK3BP1-201ENST00000428678 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
UPK3BP1-201ENST00000428678 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
UPK3BP1-201ENST00000428678 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
UPK3BP1-201ENST00000428678 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
UPK3BP1-201ENST00000428678 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
UPK3BP1-201ENST00000428678 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
UPK3BP1-201ENST00000428678 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
UPK3BP1-201ENST00000428678 INE1O15225 51 aa2.71□□□□□ -1.98
UPK3BP1-201ENST00000428678 H3BS24 57 aa2.54□□□□□ -2
UPK3BP1-201ENST00000428678 PRM1P04553 51 aa2.39□□□□□ -2.03
UPK3BP1-201ENST00000428678 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 65.7 ms