RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
CLHC1-207ENST00000428621 MT1XP80297 61 aa3.24□□□□□ -1.89
CLHC1-207ENST00000428621 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
CLHC1-207ENST00000428621 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
CLHC1-207ENST00000428621 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
CLHC1-207ENST00000428621 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
CLHC1-207ENST00000428621 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
CLHC1-207ENST00000428621 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
CLHC1-207ENST00000428621 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
CLHC1-207ENST00000428621 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
CLHC1-207ENST00000428621 USH2AO75445 5202 aa3.02□□□□□ -1.93
CLHC1-207ENST00000428621 MT3P25713 68 aa3.02□□□□□ -1.93
CLHC1-207ENST00000428621 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
CLHC1-207ENST00000428621 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
CLHC1-207ENST00000428621 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
CLHC1-207ENST00000428621 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
CLHC1-207ENST00000428621 KMT2DO14686 5537 aa2.92□□□□□ -1.94
CLHC1-207ENST00000428621 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
CLHC1-207ENST00000428621 INE1O15225 51 aa2.88□□□□□ -1.95
CLHC1-207ENST00000428621 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
CLHC1-207ENST00000428621 MT1EP04732 61 aa2.83□□□□□ -1.96
CLHC1-207ENST00000428621 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
CLHC1-207ENST00000428621 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CLHC1-207ENST00000428621 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
CLHC1-207ENST00000428621 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
CLHC1-207ENST00000428621 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
CLHC1-207ENST00000428621 MT1LQ93083 61 aa2.81□□□□□ -1.96
CLHC1-207ENST00000428621 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CLHC1-207ENST00000428621 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
CLHC1-207ENST00000428621 NEBP20929 6669 aa2.8□□□□□ -1.96
CLHC1-207ENST00000428621 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
CLHC1-207ENST00000428621 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
CLHC1-207ENST00000428621 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.97
CLHC1-207ENST00000428621 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
CLHC1-207ENST00000428621 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
CLHC1-207ENST00000428621 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
CLHC1-207ENST00000428621 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
CLHC1-207ENST00000428621 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.98
CLHC1-207ENST00000428621 MT1GP13640 62 aa2.65□□□□□ -1.99
CLHC1-207ENST00000428621 MT1MQ8N339 61 aa2.64□□□□□ -1.99
CLHC1-207ENST00000428621 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
CLHC1-207ENST00000428621 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
CLHC1-207ENST00000428621 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
CLHC1-207ENST00000428621 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
CLHC1-207ENST00000428621 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
CLHC1-207ENST00000428621 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
CLHC1-207ENST00000428621 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
CLHC1-207ENST00000428621 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CLHC1-207ENST00000428621 MDN1Q9NU22 5596 aa2.43□□□□□ -2.02
CLHC1-207ENST00000428621 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
CLHC1-207ENST00000428621 MT1AP04731 61 aa2.38□□□□□ -2.03
CLHC1-207ENST00000428621 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
CLHC1-207ENST00000428621 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
CLHC1-207ENST00000428621 KRTAP6-1Q3LI64 71 aa2.36□□□□□ -2.03
CLHC1-207ENST00000428621 SPRR2EP22531 72 aa2.32□□□□□ -2.04
CLHC1-207ENST00000428621 SPRR2BP35325 72 aa2.32□□□□□ -2.04
CLHC1-207ENST00000428621 SPRR2AP35326 72 aa2.32□□□□□ -2.04
CLHC1-207ENST00000428621 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
CLHC1-207ENST00000428621 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
CLHC1-207ENST00000428621 SPRR2DP22532 72 aa2.25□□□□□ -2.05
CLHC1-207ENST00000428621 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
CLHC1-207ENST00000428621 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
CLHC1-207ENST00000428621 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
CLHC1-207ENST00000428621 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
CLHC1-207ENST00000428621 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
CLHC1-207ENST00000428621 PRM1P04553 51 aa2.09□□□□□ -2.07
CLHC1-207ENST00000428621 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
CLHC1-207ENST00000428621 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
CLHC1-207ENST00000428621 MT4P47944 62 aa1.98□□□□□ -2.09
CLHC1-207ENST00000428621 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
CLHC1-207ENST00000428621 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
CLHC1-207ENST00000428621 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
CLHC1-207ENST00000428621 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
CLHC1-207ENST00000428621 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CLHC1-207ENST00000428621 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
CLHC1-207ENST00000428621 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
CLHC1-207ENST00000428621 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
CLHC1-207ENST00000428621 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 136.5 ms