RNA–Protein interactions for RNA: ENST00000428479.3

GGCX-204, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-204ENST00000428479 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
GGCX-204ENST00000428479 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
GGCX-204ENST00000428479 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
GGCX-204ENST00000428479 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
GGCX-204ENST00000428479 MT1LQ93083 61 aa4.41□□□□□ -1.7
GGCX-204ENST00000428479 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
GGCX-204ENST00000428479 MT1GP13640 62 aa4.4□□□□□ -1.71
GGCX-204ENST00000428479 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
GGCX-204ENST00000428479 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
GGCX-204ENST00000428479 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
GGCX-204ENST00000428479 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
GGCX-204ENST00000428479 ROMO1P60602 79 aa4.36□□□□□ -1.71
GGCX-204ENST00000428479 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
GGCX-204ENST00000428479 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
GGCX-204ENST00000428479 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
GGCX-204ENST00000428479 MT1MQ8N339 61 aa4.33□□□□□ -1.72
GGCX-204ENST00000428479 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
GGCX-204ENST00000428479 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
GGCX-204ENST00000428479 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
GGCX-204ENST00000428479 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
GGCX-204ENST00000428479 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
GGCX-204ENST00000428479 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
GGCX-204ENST00000428479 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
GGCX-204ENST00000428479 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
GGCX-204ENST00000428479 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
GGCX-204ENST00000428479 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
GGCX-204ENST00000428479 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
GGCX-204ENST00000428479 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
GGCX-204ENST00000428479 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
GGCX-204ENST00000428479 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
GGCX-204ENST00000428479 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
GGCX-204ENST00000428479 MT4P47944 62 aa3.95□□□□□ -1.78
GGCX-204ENST00000428479 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
GGCX-204ENST00000428479 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
GGCX-204ENST00000428479 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
GGCX-204ENST00000428479 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
GGCX-204ENST00000428479 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
GGCX-204ENST00000428479 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
GGCX-204ENST00000428479 MT1AP04731 61 aa3.75□□□□□ -1.81
GGCX-204ENST00000428479 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
GGCX-204ENST00000428479 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
GGCX-204ENST00000428479 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
GGCX-204ENST00000428479 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
GGCX-204ENST00000428479 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
GGCX-204ENST00000428479 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
GGCX-204ENST00000428479 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
GGCX-204ENST00000428479 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
GGCX-204ENST00000428479 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
GGCX-204ENST00000428479 MT3P25713 68 aa3.42□□□□□ -1.86
GGCX-204ENST00000428479 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
GGCX-204ENST00000428479 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
GGCX-204ENST00000428479 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
GGCX-204ENST00000428479 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
GGCX-204ENST00000428479 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.89
GGCX-204ENST00000428479 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
GGCX-204ENST00000428479 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
GGCX-204ENST00000428479 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
GGCX-204ENST00000428479 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
GGCX-204ENST00000428479 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
GGCX-204ENST00000428479 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
GGCX-204ENST00000428479 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
GGCX-204ENST00000428479 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
GGCX-204ENST00000428479 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
GGCX-204ENST00000428479 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
GGCX-204ENST00000428479 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
GGCX-204ENST00000428479 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
GGCX-204ENST00000428479 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
GGCX-204ENST00000428479 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
GGCX-204ENST00000428479 INE1O15225 51 aa2.62□□□□□ -1.99
GGCX-204ENST00000428479 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
GGCX-204ENST00000428479 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
GGCX-204ENST00000428479 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
GGCX-204ENST00000428479 PRM1P04553 51 aa2.24□□□□□ -2.05
GGCX-204ENST00000428479 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
GGCX-204ENST00000428479 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
GGCX-204ENST00000428479 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
GGCX-204ENST00000428479 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
GGCX-204ENST00000428479 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 70.9 ms