RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 A0A1B0GU69 56 aa5.66□□□□□ -1.5
VARS-216ENST00000428445 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
VARS-216ENST00000428445 H7BZZ5 65 aa5.65□□□□□ -1.5
VARS-216ENST00000428445 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
VARS-216ENST00000428445 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
VARS-216ENST00000428445 A8MU10 97 aa5.58□□□□□ -1.52
VARS-216ENST00000428445 KRTAP20-2Q3LI61 65 aa5.53□□□□□ -1.52
VARS-216ENST00000428445 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
VARS-216ENST00000428445 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
VARS-216ENST00000428445 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
VARS-216ENST00000428445 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
VARS-216ENST00000428445 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
VARS-216ENST00000428445 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
VARS-216ENST00000428445 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
VARS-216ENST00000428445 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
VARS-216ENST00000428445 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
VARS-216ENST00000428445 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
VARS-216ENST00000428445 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
VARS-216ENST00000428445 UQCR11O14957 56 aa5.28□□□□□ -1.56
VARS-216ENST00000428445 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
VARS-216ENST00000428445 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
VARS-216ENST00000428445 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
VARS-216ENST00000428445 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
VARS-216ENST00000428445 K7ERS5 55 aa5.11□□□□□ -1.59
VARS-216ENST00000428445 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
VARS-216ENST00000428445 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
VARS-216ENST00000428445 TMEM258P61165 79 aa5.04□□□□□ -1.6
VARS-216ENST00000428445 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
VARS-216ENST00000428445 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
VARS-216ENST00000428445 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
VARS-216ENST00000428445 KRTAP5-8O75690 187 aa4.97□□□□□ -1.61
VARS-216ENST00000428445 MT1AP04731 61 aa4.95□□□□□ -1.62
VARS-216ENST00000428445 V9GYY9 64 aa4.91□□□□□ -1.62
VARS-216ENST00000428445 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.63
VARS-216ENST00000428445 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
VARS-216ENST00000428445 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
VARS-216ENST00000428445 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
VARS-216ENST00000428445 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
VARS-216ENST00000428445 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
VARS-216ENST00000428445 Q1T7F1 81 aa4.81□□□□□ -1.64
VARS-216ENST00000428445 PSPHP1O15172 72 aa4.8□□□□□ -1.64
VARS-216ENST00000428445 PCP4P48539 62 aa4.8□□□□□ -1.64
VARS-216ENST00000428445 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
VARS-216ENST00000428445 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
VARS-216ENST00000428445 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
VARS-216ENST00000428445 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
VARS-216ENST00000428445 A6NED7 52 aa4.66□□□□□ -1.66
VARS-216ENST00000428445 ROMO1P60602 79 aa4.66□□□□□ -1.66
VARS-216ENST00000428445 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.67
VARS-216ENST00000428445 MT3P25713 68 aa4.57□□□□□ -1.68
VARS-216ENST00000428445 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
VARS-216ENST00000428445 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
VARS-216ENST00000428445 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
VARS-216ENST00000428445 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
VARS-216ENST00000428445 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
VARS-216ENST00000428445 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
VARS-216ENST00000428445 PRO0628Q9UI54 55 aa3.93□□□□□ -1.78
VARS-216ENST00000428445 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
VARS-216ENST00000428445 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
VARS-216ENST00000428445 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
VARS-216ENST00000428445 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
VARS-216ENST00000428445 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
VARS-216ENST00000428445 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
VARS-216ENST00000428445 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
VARS-216ENST00000428445 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
VARS-216ENST00000428445 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
VARS-216ENST00000428445 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
VARS-216ENST00000428445 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
VARS-216ENST00000428445 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
VARS-216ENST00000428445 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
VARS-216ENST00000428445 LUZP6Q538Z0 58 aa3□□□□□ -1.93
VARS-216ENST00000428445 H3BS24 57 aa2.88□□□□□ -1.95
VARS-216ENST00000428445 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
VARS-216ENST00000428445 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
VARS-216ENST00000428445 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
VARS-216ENST00000428445 INE1O15225 51 aa2.41□□□□□ -2.02
VARS-216ENST00000428445 PRM1P04553 51 aa2.32□□□□□ -2.04
VARS-216ENST00000428445 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 75.2 ms