RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
DDR1-235ENST00000428153 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
DDR1-235ENST00000428153 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
DDR1-235ENST00000428153 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
DDR1-235ENST00000428153 TNP1P09430 55 aa6.01□□□□□ -1.45
DDR1-235ENST00000428153 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
DDR1-235ENST00000428153 KRTAP5-10Q6L8G5 202 aa6.01□□□□□ -1.45
DDR1-235ENST00000428153 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
DDR1-235ENST00000428153 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
DDR1-235ENST00000428153 A8MU10 97 aa5.94□□□□□ -1.46
DDR1-235ENST00000428153 V9GYY9 64 aa5.93□□□□□ -1.46
DDR1-235ENST00000428153 PSPHP1O15172 72 aa5.92□□□□□ -1.46
DDR1-235ENST00000428153 Q1T7F1 81 aa5.92□□□□□ -1.46
DDR1-235ENST00000428153 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
DDR1-235ENST00000428153 UQCR11O14957 56 aa5.87□□□□□ -1.47
DDR1-235ENST00000428153 KRTAP5-7Q6L8G8 165 aa5.84□□□□□ -1.47
DDR1-235ENST00000428153 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
DDR1-235ENST00000428153 KRTAP5-3Q6L8H2 238 aa5.81□□□□□ -1.48
DDR1-235ENST00000428153 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
DDR1-235ENST00000428153 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
DDR1-235ENST00000428153 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
DDR1-235ENST00000428153 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
DDR1-235ENST00000428153 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
DDR1-235ENST00000428153 A6NED7 52 aa5.73□□□□□ -1.49
DDR1-235ENST00000428153 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
DDR1-235ENST00000428153 K7ERS5 55 aa5.63□□□□□ -1.51
DDR1-235ENST00000428153 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
DDR1-235ENST00000428153 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
DDR1-235ENST00000428153 KRTAP25-1Q3LHN0 102 aa5.56□□□□□ -1.52
DDR1-235ENST00000428153 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
DDR1-235ENST00000428153 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
DDR1-235ENST00000428153 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
DDR1-235ENST00000428153 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
DDR1-235ENST00000428153 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
DDR1-235ENST00000428153 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
DDR1-235ENST00000428153 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
DDR1-235ENST00000428153 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
DDR1-235ENST00000428153 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
DDR1-235ENST00000428153 ROMO1P60602 79 aa5.3□□□□□ -1.56
DDR1-235ENST00000428153 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
DDR1-235ENST00000428153 MT1AP04731 61 aa5.26□□□□□ -1.57
DDR1-235ENST00000428153 AHNAKQ09666 5890 aaKnown RBP5.25□□□□□ -1.57
DDR1-235ENST00000428153 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
DDR1-235ENST00000428153 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
DDR1-235ENST00000428153 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
DDR1-235ENST00000428153 MUC5BQ9HC84 5762 aaPredicted RBP5.11□□□□□ -1.59
DDR1-235ENST00000428153 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
DDR1-235ENST00000428153 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
DDR1-235ENST00000428153 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
DDR1-235ENST00000428153 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
DDR1-235ENST00000428153 PMAIP1Q13794 54 aa5□□□□□ -1.61
DDR1-235ENST00000428153 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
DDR1-235ENST00000428153 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
DDR1-235ENST00000428153 MT3P25713 68 aa4.84□□□□□ -1.63
DDR1-235ENST00000428153 KRTAP5-1Q6L8H4 278 aa4.8□□□□□ -1.64
DDR1-235ENST00000428153 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
DDR1-235ENST00000428153 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
DDR1-235ENST00000428153 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
DDR1-235ENST00000428153 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
DDR1-235ENST00000428153 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
DDR1-235ENST00000428153 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
DDR1-235ENST00000428153 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
DDR1-235ENST00000428153 H3BS24 57 aa3.84□□□□□ -1.79
DDR1-235ENST00000428153 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
DDR1-235ENST00000428153 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
DDR1-235ENST00000428153 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
DDR1-235ENST00000428153 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
DDR1-235ENST00000428153 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
DDR1-235ENST00000428153 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
DDR1-235ENST00000428153 A0A0A0MQY5 61 aa3.53□□□□□ -1.84
DDR1-235ENST00000428153 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
DDR1-235ENST00000428153 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
DDR1-235ENST00000428153 INE1O15225 51 aa3.25□□□□□ -1.89
DDR1-235ENST00000428153 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
DDR1-235ENST00000428153 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
DDR1-235ENST00000428153 PRM1P04553 51 aa2.76□□□□□ -1.97
DDR1-235ENST00000428153 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
DDR1-235ENST00000428153 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 172.3 ms