RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.12
FAAP20-209ENST00000428120 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
FAAP20-209ENST00000428120 KRTAP9-6A8MVA2 160 aa7.98□□□□□ -1.13
FAAP20-209ENST00000428120 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
FAAP20-209ENST00000428120 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
FAAP20-209ENST00000428120 KRTAP19-3Q7Z4W3 81 aa7.87□□□□□ -1.15
FAAP20-209ENST00000428120 KRTAP4-3Q9BYR4 195 aa7.84□□□□□ -1.15
FAAP20-209ENST00000428120 MT1GP13640 62 aa7.79□□□□□ -1.16
FAAP20-209ENST00000428120 MT1MQ8N339 61 aa7.79□□□□□ -1.16
FAAP20-209ENST00000428120 MDN1Q9NU22 5596 aa7.75□□□□□ -1.17
FAAP20-209ENST00000428120 DSTQ03001 7570 aaKnown RBP7.7□□□□□ -1.18
FAAP20-209ENST00000428120 LCE5AQ5TCM9 118 aa7.69□□□□□ -1.18
FAAP20-209ENST00000428120 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
FAAP20-209ENST00000428120 KRTAP5-9P26371 169 aa7.59□□□□□ -1.19
FAAP20-209ENST00000428120 LCE1AQ5T7P2 110 aa7.49□□□□□ -1.21
FAAP20-209ENST00000428120 KRTAP9-6A0A140TA67 174 aa7.41□□□□□ -1.22
FAAP20-209ENST00000428120 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
FAAP20-209ENST00000428120 KRTAP2-3P0C7H8 128 aa7.4□□□□□ -1.23
FAAP20-209ENST00000428120 SPRR2EP22531 72 aa7.4□□□□□ -1.23
FAAP20-209ENST00000428120 SPRR2BP35325 72 aa7.4□□□□□ -1.23
FAAP20-209ENST00000428120 SPRR2AP35326 72 aa7.4□□□□□ -1.23
FAAP20-209ENST00000428120 KRTAP2-4Q9BYR9 128 aa7.4□□□□□ -1.23
FAAP20-209ENST00000428120 KRTAP2-1Q9BYU5 128 aa7.4□□□□□ -1.23
FAAP20-209ENST00000428120 KRTAP6-3Q3LI67 103 aa7.26□□□□□ -1.25
FAAP20-209ENST00000428120 SPRR2DP22532 72 aa7.1□□□□□ -1.27
FAAP20-209ENST00000428120 INE1O15225 51 aa7.02□□□□□ -1.29
FAAP20-209ENST00000428120 NEBP20929 6669 aa6.95□□□□□ -1.3
FAAP20-209ENST00000428120 KRTAP6-1Q3LI64 71 aa6.95□□□□□ -1.3
FAAP20-209ENST00000428120 KRTAP5-5Q701N2 237 aaPredicted RBP6.95□□□□□ -1.3
FAAP20-209ENST00000428120 MT1AP04731 61 aa6.89□□□□□ -1.31
FAAP20-209ENST00000428120 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
FAAP20-209ENST00000428120 KRTAP9-7A8MTY7 169 aa6.87□□□□□ -1.31
FAAP20-209ENST00000428120 SYNE1Q8NF91 8797 aaKnown RBP6.86□□□□□ -1.31
FAAP20-209ENST00000428120 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
FAAP20-209ENST00000428120 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
FAAP20-209ENST00000428120 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
FAAP20-209ENST00000428120 KRTAP5-4Q6L8H1 288 aa6.41□□□□□ -1.38
FAAP20-209ENST00000428120 KRTAP6-2Q3LI66 62 aa6.35□□□□□ -1.39
FAAP20-209ENST00000428120 LCE3DQ9BYE3 92 aa6.3□□□□□ -1.4
FAAP20-209ENST00000428120 MT4P47944 62 aa6.26□□□□□ -1.41
FAAP20-209ENST00000428120 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
FAAP20-209ENST00000428120 OBSCNQ5VST9 7968 aa6.23□□□□□ -1.41
FAAP20-209ENST00000428120 MT3P25713 68 aa6.22□□□□□ -1.41
FAAP20-209ENST00000428120 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
FAAP20-209ENST00000428120 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
FAAP20-209ENST00000428120 LCE3EQ5T5B0 92 aa6.14□□□□□ -1.43
FAAP20-209ENST00000428120 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
FAAP20-209ENST00000428120 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
FAAP20-209ENST00000428120 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
FAAP20-209ENST00000428120 LCE1DQ5T752 114 aa6.02□□□□□ -1.45
FAAP20-209ENST00000428120 KRTAP5-2Q701N4 177 aa5.88□□□□□ -1.47
FAAP20-209ENST00000428120 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
FAAP20-209ENST00000428120 PRM1P04553 51 aa5.62□□□□□ -1.51
FAAP20-209ENST00000428120 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
FAAP20-209ENST00000428120 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
FAAP20-209ENST00000428120 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
FAAP20-209ENST00000428120 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.58
FAAP20-209ENST00000428120 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.59
FAAP20-209ENST00000428120 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
FAAP20-209ENST00000428120 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
FAAP20-209ENST00000428120 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
FAAP20-209ENST00000428120 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
FAAP20-209ENST00000428120 LCE1CQ5T751 118 aa4.93□□□□□ -1.62
FAAP20-209ENST00000428120 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
FAAP20-209ENST00000428120 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.61□□□□□ -1.67
FAAP20-209ENST00000428120 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.67
FAAP20-209ENST00000428120 KRTAP21-2Q3LI59 83 aa4.51□□□□□ -1.69
FAAP20-209ENST00000428120 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
FAAP20-209ENST00000428120 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
FAAP20-209ENST00000428120 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
FAAP20-209ENST00000428120 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
FAAP20-209ENST00000428120 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
FAAP20-209ENST00000428120 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.74
FAAP20-209ENST00000428120 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
FAAP20-209ENST00000428120 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
FAAP20-209ENST00000428120 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
FAAP20-209ENST00000428120 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
FAAP20-209ENST00000428120 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 148.2 ms