RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
PHF1-204ENST00000427826 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
PHF1-204ENST00000427826 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
PHF1-204ENST00000427826 KRTAP4-2Q9BYR5 136 aa5.71□□□□□ -1.5
PHF1-204ENST00000427826 A8MU10 97 aa5.7□□□□□ -1.5
PHF1-204ENST00000427826 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
PHF1-204ENST00000427826 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
PHF1-204ENST00000427826 MT1EP04732 61 aa5.65□□□□□ -1.5
PHF1-204ENST00000427826 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
PHF1-204ENST00000427826 UQCR11O14957 56 aa5.61□□□□□ -1.51
PHF1-204ENST00000427826 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
PHF1-204ENST00000427826 PSPHP1O15172 72 aa5.56□□□□□ -1.52
PHF1-204ENST00000427826 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
PHF1-204ENST00000427826 MT1GP13640 62 aa5.5□□□□□ -1.53
PHF1-204ENST00000427826 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
PHF1-204ENST00000427826 TNP1P09430 55 aa5.49□□□□□ -1.53
PHF1-204ENST00000427826 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
PHF1-204ENST00000427826 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
PHF1-204ENST00000427826 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
PHF1-204ENST00000427826 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
PHF1-204ENST00000427826 K7ERS5 55 aa5.42□□□□□ -1.54
PHF1-204ENST00000427826 A6NED7 52 aa5.41□□□□□ -1.54
PHF1-204ENST00000427826 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
PHF1-204ENST00000427826 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
PHF1-204ENST00000427826 MT1LQ93083 61 aa5.39□□□□□ -1.55
PHF1-204ENST00000427826 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
PHF1-204ENST00000427826 MT1MQ8N339 61 aa5.37□□□□□ -1.55
PHF1-204ENST00000427826 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
PHF1-204ENST00000427826 GPR98Q8WXG9 6306 aa5.31□□□□□ -1.56
PHF1-204ENST00000427826 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
PHF1-204ENST00000427826 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
PHF1-204ENST00000427826 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
PHF1-204ENST00000427826 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
PHF1-204ENST00000427826 MT4P47944 62 aa5.19□□□□□ -1.58
PHF1-204ENST00000427826 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
PHF1-204ENST00000427826 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
PHF1-204ENST00000427826 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
PHF1-204ENST00000427826 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
PHF1-204ENST00000427826 MT3P25713 68 aa5.03□□□□□ -1.6
PHF1-204ENST00000427826 ROMO1P60602 79 aa5.03□□□□□ -1.6
PHF1-204ENST00000427826 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
PHF1-204ENST00000427826 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
PHF1-204ENST00000427826 KRTAP5-10Q6L8G5 202 aa4.9□□□□□ -1.63
PHF1-204ENST00000427826 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
PHF1-204ENST00000427826 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
PHF1-204ENST00000427826 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
PHF1-204ENST00000427826 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
PHF1-204ENST00000427826 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
PHF1-204ENST00000427826 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
PHF1-204ENST00000427826 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
PHF1-204ENST00000427826 MT1AP04731 61 aa4.59□□□□□ -1.67
PHF1-204ENST00000427826 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
PHF1-204ENST00000427826 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
PHF1-204ENST00000427826 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
PHF1-204ENST00000427826 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
PHF1-204ENST00000427826 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
PHF1-204ENST00000427826 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
PHF1-204ENST00000427826 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
PHF1-204ENST00000427826 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
PHF1-204ENST00000427826 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
PHF1-204ENST00000427826 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
PHF1-204ENST00000427826 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
PHF1-204ENST00000427826 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
PHF1-204ENST00000427826 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
PHF1-204ENST00000427826 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
PHF1-204ENST00000427826 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
PHF1-204ENST00000427826 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
PHF1-204ENST00000427826 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
PHF1-204ENST00000427826 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
PHF1-204ENST00000427826 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
PHF1-204ENST00000427826 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
PHF1-204ENST00000427826 INE1O15225 51 aa3.18□□□□□ -1.9
PHF1-204ENST00000427826 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
PHF1-204ENST00000427826 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
PHF1-204ENST00000427826 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
PHF1-204ENST00000427826 PRM1P04553 51 aa2.57□□□□□ -2
PHF1-204ENST00000427826 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
PHF1-204ENST00000427826 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms