RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
RTN4-210ENST00000427710 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
RTN4-210ENST00000427710 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
RTN4-210ENST00000427710 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
RTN4-210ENST00000427710 TNP1P09430 55 aa5.41□□□□□ -1.54
RTN4-210ENST00000427710 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
RTN4-210ENST00000427710 UQCR11O14957 56 aa5.4□□□□□ -1.54
RTN4-210ENST00000427710 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
RTN4-210ENST00000427710 GPR98Q8WXG9 6306 aa5.33□□□□□ -1.56
RTN4-210ENST00000427710 MIR22HGQ0VDD5 57 aa5.32□□□□□ -1.56
RTN4-210ENST00000427710 MT1GP13640 62 aa5.31□□□□□ -1.56
RTN4-210ENST00000427710 PSPHP1O15172 72 aa5.3□□□□□ -1.56
RTN4-210ENST00000427710 MT1LQ93083 61 aa5.3□□□□□ -1.56
RTN4-210ENST00000427710 MT1MQ8N339 61 aa5.27□□□□□ -1.57
RTN4-210ENST00000427710 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
RTN4-210ENST00000427710 Q1T7F1 81 aa5.23□□□□□ -1.57
RTN4-210ENST00000427710 V9GYY9 64 aa5.23□□□□□ -1.57
RTN4-210ENST00000427710 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
RTN4-210ENST00000427710 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
RTN4-210ENST00000427710 K7ERS5 55 aa5.15□□□□□ -1.59
RTN4-210ENST00000427710 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
RTN4-210ENST00000427710 A6NED7 52 aa5.09□□□□□ -1.59
RTN4-210ENST00000427710 PCP4P48539 62 aa5.04□□□□□ -1.6
RTN4-210ENST00000427710 MT4P47944 62 aa5.02□□□□□ -1.61
RTN4-210ENST00000427710 RPS28P62857 69 aaKnown RBP4.98□□□□□ -1.61
RTN4-210ENST00000427710 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
RTN4-210ENST00000427710 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
RTN4-210ENST00000427710 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
RTN4-210ENST00000427710 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
RTN4-210ENST00000427710 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
RTN4-210ENST00000427710 ROMO1P60602 79 aa4.86□□□□□ -1.63
RTN4-210ENST00000427710 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
RTN4-210ENST00000427710 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
RTN4-210ENST00000427710 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
RTN4-210ENST00000427710 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
RTN4-210ENST00000427710 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
RTN4-210ENST00000427710 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
RTN4-210ENST00000427710 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
RTN4-210ENST00000427710 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
RTN4-210ENST00000427710 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
RTN4-210ENST00000427710 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
RTN4-210ENST00000427710 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
RTN4-210ENST00000427710 MT1AP04731 61 aa4.5□□□□□ -1.69
RTN4-210ENST00000427710 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
RTN4-210ENST00000427710 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
RTN4-210ENST00000427710 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
RTN4-210ENST00000427710 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
RTN4-210ENST00000427710 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
RTN4-210ENST00000427710 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
RTN4-210ENST00000427710 MT3P25713 68 aa4.09□□□□□ -1.75
RTN4-210ENST00000427710 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
RTN4-210ENST00000427710 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
RTN4-210ENST00000427710 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
RTN4-210ENST00000427710 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
RTN4-210ENST00000427710 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
RTN4-210ENST00000427710 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
RTN4-210ENST00000427710 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
RTN4-210ENST00000427710 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
RTN4-210ENST00000427710 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
RTN4-210ENST00000427710 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
RTN4-210ENST00000427710 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
RTN4-210ENST00000427710 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
RTN4-210ENST00000427710 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
RTN4-210ENST00000427710 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
RTN4-210ENST00000427710 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
RTN4-210ENST00000427710 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
RTN4-210ENST00000427710 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
RTN4-210ENST00000427710 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
RTN4-210ENST00000427710 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RTN4-210ENST00000427710 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
RTN4-210ENST00000427710 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
RTN4-210ENST00000427710 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
RTN4-210ENST00000427710 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
RTN4-210ENST00000427710 PRM1P04553 51 aa2.53□□□□□ -2
RTN4-210ENST00000427710 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
RTN4-210ENST00000427710 INE1O15225 51 aa2.13□□□□□ -2.07
RTN4-210ENST00000427710 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
RTN4-210ENST00000427710 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 60.2 ms