RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 GPR98Q8WXG9 6306 aa5.55□□□□□ -1.52
HLA-DQB2-230ENST00000427449 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
HLA-DQB2-230ENST00000427449 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
HLA-DQB2-230ENST00000427449 HMCN1Q96RW7 5635 aa5.52□□□□□ -1.53
HLA-DQB2-230ENST00000427449 TNP1P09430 55 aa5.51□□□□□ -1.53
HLA-DQB2-230ENST00000427449 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
HLA-DQB2-230ENST00000427449 V9GYY9 64 aa5.48□□□□□ -1.53
HLA-DQB2-230ENST00000427449 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
HLA-DQB2-230ENST00000427449 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
HLA-DQB2-230ENST00000427449 Q1T7F1 81 aa5.45□□□□□ -1.54
HLA-DQB2-230ENST00000427449 MT4P47944 62 aa5.44□□□□□ -1.54
HLA-DQB2-230ENST00000427449 PRR15LQ9BU68 103 aa5.4□□□□□ -1.54
HLA-DQB2-230ENST00000427449 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
HLA-DQB2-230ENST00000427449 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
HLA-DQB2-230ENST00000427449 AHNAK2Q8IVF2 5795 aa5.36□□□□□ -1.55
HLA-DQB2-230ENST00000427449 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
HLA-DQB2-230ENST00000427449 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
HLA-DQB2-230ENST00000427449 UQCR11O14957 56 aa5.3□□□□□ -1.56
HLA-DQB2-230ENST00000427449 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
HLA-DQB2-230ENST00000427449 PSPHP1O15172 72 aa5.27□□□□□ -1.57
HLA-DQB2-230ENST00000427449 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
HLA-DQB2-230ENST00000427449 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
HLA-DQB2-230ENST00000427449 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
HLA-DQB2-230ENST00000427449 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
HLA-DQB2-230ENST00000427449 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
HLA-DQB2-230ENST00000427449 A6NED7 52 aa5.15□□□□□ -1.59
HLA-DQB2-230ENST00000427449 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
HLA-DQB2-230ENST00000427449 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
HLA-DQB2-230ENST00000427449 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
HLA-DQB2-230ENST00000427449 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
HLA-DQB2-230ENST00000427449 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
HLA-DQB2-230ENST00000427449 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
HLA-DQB2-230ENST00000427449 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
HLA-DQB2-230ENST00000427449 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
HLA-DQB2-230ENST00000427449 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
HLA-DQB2-230ENST00000427449 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
HLA-DQB2-230ENST00000427449 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
HLA-DQB2-230ENST00000427449 K7ERS5 55 aa4.93□□□□□ -1.62
HLA-DQB2-230ENST00000427449 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
HLA-DQB2-230ENST00000427449 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
HLA-DQB2-230ENST00000427449 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
HLA-DQB2-230ENST00000427449 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
HLA-DQB2-230ENST00000427449 MT1AP04731 61 aa4.84□□□□□ -1.63
HLA-DQB2-230ENST00000427449 ROMO1P60602 79 aa4.75□□□□□ -1.65
HLA-DQB2-230ENST00000427449 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
HLA-DQB2-230ENST00000427449 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
HLA-DQB2-230ENST00000427449 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
HLA-DQB2-230ENST00000427449 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
HLA-DQB2-230ENST00000427449 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
HLA-DQB2-230ENST00000427449 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
HLA-DQB2-230ENST00000427449 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
HLA-DQB2-230ENST00000427449 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
HLA-DQB2-230ENST00000427449 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
HLA-DQB2-230ENST00000427449 MT3P25713 68 aa4.34□□□□□ -1.71
HLA-DQB2-230ENST00000427449 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
HLA-DQB2-230ENST00000427449 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
HLA-DQB2-230ENST00000427449 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
HLA-DQB2-230ENST00000427449 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
HLA-DQB2-230ENST00000427449 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
HLA-DQB2-230ENST00000427449 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
HLA-DQB2-230ENST00000427449 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
HLA-DQB2-230ENST00000427449 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
HLA-DQB2-230ENST00000427449 H3BS24 57 aa3.77□□□□□ -1.81
HLA-DQB2-230ENST00000427449 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
HLA-DQB2-230ENST00000427449 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
HLA-DQB2-230ENST00000427449 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
HLA-DQB2-230ENST00000427449 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
HLA-DQB2-230ENST00000427449 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
HLA-DQB2-230ENST00000427449 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
HLA-DQB2-230ENST00000427449 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
HLA-DQB2-230ENST00000427449 INE1O15225 51 aa3.25□□□□□ -1.89
HLA-DQB2-230ENST00000427449 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
HLA-DQB2-230ENST00000427449 PHGR1C9JFL3 82 aa3□□□□□ -1.93
HLA-DQB2-230ENST00000427449 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
HLA-DQB2-230ENST00000427449 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
HLA-DQB2-230ENST00000427449 PRM1P04553 51 aa2.46□□□□□ -2.02
HLA-DQB2-230ENST00000427449 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
HLA-DQB2-230ENST00000427449 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 79.8 ms