RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
GINS3-203ENST00000426538 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
GINS3-203ENST00000426538 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
GINS3-203ENST00000426538 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
GINS3-203ENST00000426538 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
GINS3-203ENST00000426538 MT1GP13640 62 aa5.28□□□□□ -1.56
GINS3-203ENST00000426538 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
GINS3-203ENST00000426538 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
GINS3-203ENST00000426538 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
GINS3-203ENST00000426538 SPRR2EP22531 72 aa5.21□□□□□ -1.58
GINS3-203ENST00000426538 SPRR2BP35325 72 aa5.21□□□□□ -1.58
GINS3-203ENST00000426538 SPRR2AP35326 72 aa5.21□□□□□ -1.58
GINS3-203ENST00000426538 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
GINS3-203ENST00000426538 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
GINS3-203ENST00000426538 MT1MQ8N339 61 aa5.18□□□□□ -1.58
GINS3-203ENST00000426538 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
GINS3-203ENST00000426538 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
GINS3-203ENST00000426538 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
GINS3-203ENST00000426538 SPRR2DP22532 72 aa5.03□□□□□ -1.6
GINS3-203ENST00000426538 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
GINS3-203ENST00000426538 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
GINS3-203ENST00000426538 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
GINS3-203ENST00000426538 NEBP20929 6669 aa4.91□□□□□ -1.62
GINS3-203ENST00000426538 A0A0A0MQY5 61 aa4.9□□□□□ -1.62
GINS3-203ENST00000426538 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
GINS3-203ENST00000426538 KRTAP9-9Q9BYP9 154 aa4.82□□□□□ -1.64
GINS3-203ENST00000426538 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
GINS3-203ENST00000426538 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
GINS3-203ENST00000426538 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
GINS3-203ENST00000426538 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
GINS3-203ENST00000426538 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
GINS3-203ENST00000426538 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
GINS3-203ENST00000426538 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
GINS3-203ENST00000426538 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
GINS3-203ENST00000426538 MT1AP04731 61 aa4.57□□□□□ -1.68
GINS3-203ENST00000426538 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
GINS3-203ENST00000426538 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
GINS3-203ENST00000426538 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
GINS3-203ENST00000426538 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
GINS3-203ENST00000426538 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
GINS3-203ENST00000426538 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
GINS3-203ENST00000426538 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
GINS3-203ENST00000426538 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
GINS3-203ENST00000426538 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
GINS3-203ENST00000426538 MT4P47944 62 aa4.37□□□□□ -1.71
GINS3-203ENST00000426538 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
GINS3-203ENST00000426538 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.73
GINS3-203ENST00000426538 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
GINS3-203ENST00000426538 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
GINS3-203ENST00000426538 MT3P25713 68 aa4.18□□□□□ -1.74
GINS3-203ENST00000426538 INE1O15225 51 aa4.15□□□□□ -1.74
GINS3-203ENST00000426538 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
GINS3-203ENST00000426538 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
GINS3-203ENST00000426538 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
GINS3-203ENST00000426538 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
GINS3-203ENST00000426538 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
GINS3-203ENST00000426538 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
GINS3-203ENST00000426538 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
GINS3-203ENST00000426538 KRTAP5-8O75690 187 aa3.53□□□□□ -1.85
GINS3-203ENST00000426538 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
GINS3-203ENST00000426538 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
GINS3-203ENST00000426538 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
GINS3-203ENST00000426538 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
GINS3-203ENST00000426538 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
GINS3-203ENST00000426538 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
GINS3-203ENST00000426538 PRM1P04553 51 aa3.31□□□□□ -1.88
GINS3-203ENST00000426538 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
GINS3-203ENST00000426538 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
GINS3-203ENST00000426538 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
GINS3-203ENST00000426538 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
GINS3-203ENST00000426538 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
GINS3-203ENST00000426538 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
GINS3-203ENST00000426538 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
GINS3-203ENST00000426538 PHGR1C9JFL3 82 aa2.56□□□□□ -2
GINS3-203ENST00000426538 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
GINS3-203ENST00000426538 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
GINS3-203ENST00000426538 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 348.4 ms