RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
HDLBP-212ENST00000426343 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
HDLBP-212ENST00000426343 MT4P47944 62 aa6.12□□□□□ -1.43
HDLBP-212ENST00000426343 HMCN1Q96RW7 5635 aa6.11□□□□□ -1.43
HDLBP-212ENST00000426343 KRTAP5-4Q6L8H1 288 aa6.09□□□□□ -1.43
HDLBP-212ENST00000426343 UQCR11O14957 56 aa6.07□□□□□ -1.44
HDLBP-212ENST00000426343 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
HDLBP-212ENST00000426343 TMEM258P61165 79 aa6.03□□□□□ -1.44
HDLBP-212ENST00000426343 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
HDLBP-212ENST00000426343 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
HDLBP-212ENST00000426343 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
HDLBP-212ENST00000426343 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
HDLBP-212ENST00000426343 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.46
HDLBP-212ENST00000426343 K7ERS5 55 aa5.84□□□□□ -1.47
HDLBP-212ENST00000426343 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
HDLBP-212ENST00000426343 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
HDLBP-212ENST00000426343 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
HDLBP-212ENST00000426343 V9GYY9 64 aa5.77□□□□□ -1.49
HDLBP-212ENST00000426343 KRTAP20-2Q3LI61 65 aa5.74□□□□□ -1.49
HDLBP-212ENST00000426343 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
HDLBP-212ENST00000426343 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
HDLBP-212ENST00000426343 PSPHP1O15172 72 aa5.71□□□□□ -1.5
HDLBP-212ENST00000426343 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
HDLBP-212ENST00000426343 Q1T7F1 81 aa5.7□□□□□ -1.5
HDLBP-212ENST00000426343 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
HDLBP-212ENST00000426343 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
HDLBP-212ENST00000426343 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
HDLBP-212ENST00000426343 KRTAP5-7Q6L8G8 165 aa5.63□□□□□ -1.51
HDLBP-212ENST00000426343 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
HDLBP-212ENST00000426343 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
HDLBP-212ENST00000426343 A6NED7 52 aa5.52□□□□□ -1.53
HDLBP-212ENST00000426343 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
HDLBP-212ENST00000426343 ROMO1P60602 79 aa5.41□□□□□ -1.54
HDLBP-212ENST00000426343 MT1AP04731 61 aa5.37□□□□□ -1.55
HDLBP-212ENST00000426343 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
HDLBP-212ENST00000426343 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
HDLBP-212ENST00000426343 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
HDLBP-212ENST00000426343 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
HDLBP-212ENST00000426343 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
HDLBP-212ENST00000426343 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
HDLBP-212ENST00000426343 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
HDLBP-212ENST00000426343 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
HDLBP-212ENST00000426343 PCP4P48539 62 aa5.03□□□□□ -1.6
HDLBP-212ENST00000426343 MT3P25713 68 aa4.94□□□□□ -1.62
HDLBP-212ENST00000426343 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
HDLBP-212ENST00000426343 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
HDLBP-212ENST00000426343 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
HDLBP-212ENST00000426343 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
HDLBP-212ENST00000426343 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
HDLBP-212ENST00000426343 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
HDLBP-212ENST00000426343 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
HDLBP-212ENST00000426343 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
HDLBP-212ENST00000426343 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
HDLBP-212ENST00000426343 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
HDLBP-212ENST00000426343 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
HDLBP-212ENST00000426343 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
HDLBP-212ENST00000426343 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
HDLBP-212ENST00000426343 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
HDLBP-212ENST00000426343 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
HDLBP-212ENST00000426343 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
HDLBP-212ENST00000426343 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
HDLBP-212ENST00000426343 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
HDLBP-212ENST00000426343 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
HDLBP-212ENST00000426343 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
HDLBP-212ENST00000426343 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
HDLBP-212ENST00000426343 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
HDLBP-212ENST00000426343 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
HDLBP-212ENST00000426343 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
HDLBP-212ENST00000426343 H3BS24 57 aa3.48□□□□□ -1.85
HDLBP-212ENST00000426343 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
HDLBP-212ENST00000426343 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
HDLBP-212ENST00000426343 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
HDLBP-212ENST00000426343 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
HDLBP-212ENST00000426343 PRM1P04553 51 aa2.74□□□□□ -1.97
HDLBP-212ENST00000426343 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
HDLBP-212ENST00000426343 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
HDLBP-212ENST00000426343 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
HDLBP-212ENST00000426343 INE1O15225 51 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 111 ms