RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
CDK3-201ENST00000425876 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
CDK3-201ENST00000425876 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
CDK3-201ENST00000425876 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
CDK3-201ENST00000425876 MT1LQ93083 61 aa5.12□□□□□ -1.59
CDK3-201ENST00000425876 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
CDK3-201ENST00000425876 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
CDK3-201ENST00000425876 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
CDK3-201ENST00000425876 SPRR2EP22531 72 aa5.02□□□□□ -1.61
CDK3-201ENST00000425876 SPRR2BP35325 72 aa5.02□□□□□ -1.61
CDK3-201ENST00000425876 SPRR2AP35326 72 aa5.02□□□□□ -1.61
CDK3-201ENST00000425876 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
CDK3-201ENST00000425876 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
CDK3-201ENST00000425876 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
CDK3-201ENST00000425876 MT1GP13640 62 aa4.98□□□□□ -1.61
CDK3-201ENST00000425876 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
CDK3-201ENST00000425876 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
CDK3-201ENST00000425876 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
CDK3-201ENST00000425876 MT1MQ8N339 61 aa4.9□□□□□ -1.63
CDK3-201ENST00000425876 H3BS24 57 aa4.86□□□□□ -1.63
CDK3-201ENST00000425876 SPRR2DP22532 72 aa4.86□□□□□ -1.63
CDK3-201ENST00000425876 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
CDK3-201ENST00000425876 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
CDK3-201ENST00000425876 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
CDK3-201ENST00000425876 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
CDK3-201ENST00000425876 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
CDK3-201ENST00000425876 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
CDK3-201ENST00000425876 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
CDK3-201ENST00000425876 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
CDK3-201ENST00000425876 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
CDK3-201ENST00000425876 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
CDK3-201ENST00000425876 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
CDK3-201ENST00000425876 MT1AP04731 61 aa4.36□□□□□ -1.71
CDK3-201ENST00000425876 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
CDK3-201ENST00000425876 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
CDK3-201ENST00000425876 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
CDK3-201ENST00000425876 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
CDK3-201ENST00000425876 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
CDK3-201ENST00000425876 MT4P47944 62 aa4.24□□□□□ -1.73
CDK3-201ENST00000425876 INE1O15225 51 aa4.19□□□□□ -1.74
CDK3-201ENST00000425876 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
CDK3-201ENST00000425876 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
CDK3-201ENST00000425876 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
CDK3-201ENST00000425876 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
CDK3-201ENST00000425876 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
CDK3-201ENST00000425876 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
CDK3-201ENST00000425876 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
CDK3-201ENST00000425876 MT3P25713 68 aa3.95□□□□□ -1.78
CDK3-201ENST00000425876 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
CDK3-201ENST00000425876 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
CDK3-201ENST00000425876 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
CDK3-201ENST00000425876 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
CDK3-201ENST00000425876 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
CDK3-201ENST00000425876 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
CDK3-201ENST00000425876 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.82
CDK3-201ENST00000425876 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
CDK3-201ENST00000425876 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
CDK3-201ENST00000425876 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CDK3-201ENST00000425876 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
CDK3-201ENST00000425876 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
CDK3-201ENST00000425876 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
CDK3-201ENST00000425876 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
CDK3-201ENST00000425876 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
CDK3-201ENST00000425876 PRM1P04553 51 aa3.3□□□□□ -1.88
CDK3-201ENST00000425876 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
CDK3-201ENST00000425876 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
CDK3-201ENST00000425876 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
CDK3-201ENST00000425876 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
CDK3-201ENST00000425876 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
CDK3-201ENST00000425876 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
CDK3-201ENST00000425876 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
CDK3-201ENST00000425876 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
CDK3-201ENST00000425876 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CDK3-201ENST00000425876 PHGR1C9JFL3 82 aa2.4□□□□□ -2.02
CDK3-201ENST00000425876 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CDK3-201ENST00000425876 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CDK3-201ENST00000425876 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 133.9 ms